RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ARL8AQ96BM9 186 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CENPTQ96BT3 561 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
VMA21-203ENST00000477649 TLCD1Q96CP7 247 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 PPP1R2P1Q96PQ5 205 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 CSPG4P5Q96PW8 444 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 RBM15Q96T37 977 aaKnown RBP eCLIP8.23□□□□□ -1.09
VMA21-203ENST00000477649 EPAS1Q99814 870 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 ZCWPW1Q9H0M4 648 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 OSBPL2Q9H1P3 480 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 SENP1Q9P0U3 644 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 FNIP2Q9P278 1114 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 STK39Q9UEW8 545 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 FBXW11Q9UKB1 542 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 ACTL7BQ9Y614 415 aa8.23□□□□□ -1.09
VMA21-203ENST00000477649 TRIP11Q15643 1979 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 YJEFN3A6XGL0 299 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 E7ENQ6 273 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 E7EVH7 732 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 AP3B1O00203 1094 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 NBNO60934 754 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 BEST1O76090 585 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 DDHD2O94830 711 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 RTN3O95197 1032 aaPredicted RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 NCAM1P13591 858 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 PECAM1P16284 738 aaPredicted RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 BDNFP23560 247 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 FDFT1P37268 417 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 OR1G1P47890 313 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 VPS41P49754 854 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 PPP2R2AP63151 447 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 COG7P83436 770 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 TRIP13Q15645 432 aaPredicted RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 CCDC142Q17RM4 750 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 KLHL38Q2WGJ6 581 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 ZC3H12AQ5D1E8 599 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 DNAJC21Q5F1R6 531 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 BSPRYQ5W0U4 402 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 HEATR6Q6AI08 1181 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 ANKS3Q6ZW76 656 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 ZNF771Q7L3S4 317 aaPredicted RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 MON1AQ86VX9 555 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 LRRC49Q8IUZ0 686 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 VPS52Q8N1B4 723 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 LRRC43Q8N309 656 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 LZTR1Q8N653 840 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 FAM71DQ8N9W8 422 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 ANKLE1Q8NAG6 615 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 ATP11CQ8NB49 1132 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 DBF4BQ8NFT6 615 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 OR10T2Q8NGX3 314 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 SLC7A14Q8TBB6 771 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 SPPL2BQ8TCT7 592 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 CLEC4CQ8WTT0 213 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 TFB1MQ8WVM0 346 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 QKIQ96PU8 341 aaKnown RBP eCLIP8.22□□□□□ -1.09
VMA21-203ENST00000477649 HAPLN3Q96S86 360 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 VAT1Q99536 393 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 PAAF1Q9BRP4 392 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 WDCPQ9H6R7 721 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 USP29Q9HBJ7 922 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 NINJ2Q9NZG7 142 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 HSFX1Q9UBD0 423 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 LGALS13Q9UHV8 139 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 SLC24A2Q9UI40 661 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 ADAM28Q9UKQ2 775 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 PCDHB5Q9Y5E4 795 aa8.22□□□□□ -1.09
VMA21-203ENST00000477649 TIMM13Q9Y5L4 95 aaPredicted RBP8.22□□□□□ -1.09
VMA21-203ENST00000477649 EEF2KO00418 725 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 NRP1O14786 923 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 FGF10O15520 208 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 KCNN4O15554 427 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 OPHN1O60890 802 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 DGKIO75912 1065 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 IGLV3-25P01717 112 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 FYNP06241 537 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 USP17L7P0C7H9 530 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 MLNP12872 115 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CCL5P13501 91 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 TPSB2P20231 275 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 FGFR3P22607 806 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CCR1P32246 355 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 CHKAP35790 457 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 GRIK1P39086 918 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 MDH1P40925 334 aaKnown RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 GLUD2P49448 558 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 KPNA1P52294 538 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 SLC18A1P54219 525 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 NRG1Q02297 640 aaPredicted RBP8.21□□□□□ -1.1
VMA21-203ENST00000477649 PPP2R5DQ14738 602 aa8.21□□□□□ -1.1
VMA21-203ENST00000477649 TPSAB1Q15661 275 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms