RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ATP11AP98196 1134 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 NNTQ13423 1086 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 HTR4Q13639 388 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 CDO1Q16878 200 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 SLC25A52Q3SY17 297 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 DDX42Q86XP3 938 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEC13-215ENST00000477547 RHOT2Q8IXI1 618 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 TXLNBQ8N3L3 684 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 FBXL6Q8N531 539 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 ST13P5Q8NFI4 369 aaPredicted RBP15.96■□□□□ 0.15
SEC13-215ENST00000477547 SH3RF2Q8TEC5 729 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 TBCBQ99426 244 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 NPY6RQ99463 290 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 KXD1Q9BQD3 176 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 TRPV4Q9HBA0 871 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 CFAP97Q9P2B7 532 aa15.96■□□□□ 0.15
SEC13-215ENST00000477547 HBS1LQ9Y450 684 aaKnown RBP15.96■□□□□ 0.15
SEC13-215ENST00000477547 M0QYT0 321 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 LEFTY2O00292 366 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 CCP110O43303 1012 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 IGLV3-25P01717 112 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 TFE3P19532 575 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 PSMA2P25787 234 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 VIPR2P41587 438 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 TBX4P57082 545 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 OGDHQ02218 1023 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 ZNF252P-AS1Q0IIN9 211 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 NME3Q13232 169 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 TRIP4Q15650 581 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 ZNF77Q15935 545 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 C15orf59Q2T9L4 293 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 ZDHHC14Q8IZN3 488 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 PLCD3Q8N3E9 789 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 CELF5Q8N6W0 485 aaKnown RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 RIN3Q8TB24 985 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 ATOH1Q92858 354 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 PLD4Q96BZ4 506 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 RSPRY1Q96DX4 576 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 ZNF830Q96NB3 372 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 PRRX2Q99811 253 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 CNPY3Q9BT09 278 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 KLF16Q9BXK1 252 aaPredicted RBP15.95■□□□□ 0.14
SEC13-215ENST00000477547 ADAM33Q9BZ11 813 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 ZFP14Q9HCL3 533 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 OSGEPQ9NPF4 335 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 ADGRG1Q9Y653 693 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 NUMBLQ9Y6R0 609 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 MYOFQ9NZM1 2061 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 KIAA1549LQ6ZVL6 1849 aa15.95■□□□□ 0.14
SEC13-215ENST00000477547 RCCD1A6NED2 376 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 TMEM191CA6NGB0 347 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 HEPACAM2A8MVW5 462 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 SCAMP3O14828 347 aaKnown RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 STC2O76061 302 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 CCDC175P0C221 793 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 GBP1P32455 592 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 RDXP35241 583 aaKnown RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 KPNA1P52294 538 aaPredicted RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 ZNF143P52747 638 aaPredicted RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 COG7P83436 770 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 ZXDBP98169 803 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 DEUP1Q05D60 604 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 CCDC14Q49A88 953 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 PARM1Q6UWI2 310 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 FNIP1Q8TF40 1166 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 FAM172AQ8WUF8 416 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 FGF14Q92915 247 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 NT5C3BQ969T7 300 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 GKN1Q9NS71 199 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 PIGVQ9NUD9 493 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 OBP2AQ9NY56 170 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 CALCOCO1Q9P1Z2 691 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 LSM7Q9UK45 103 aaKnown RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 TLR6Q9Y2C9 796 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 SH3BP1Q9Y3L3 701 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 LOC730098B7Z3J9 87 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 ANHXE9PGG2 379 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 ECI2O75521 394 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 IGLV3-27P01718 113 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 APOEP02649 317 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 TCF3P15923 654 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 CORO1AP31146 461 aaKnown RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 RING1Q06587 406 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 NUGGCQ68CJ6 796 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 TANGO2Q6ICL3 276 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 VITQ6UXI7 678 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 SND1Q7KZF4 910 aaKnown RBP eCLIP15.94■□□□□ 0.143e-11■■■□□ 16.6
SEC13-215ENST00000477547 STRADAQ7RTN6 431 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 SLC35G2Q8TBE7 412 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 BPIFB1Q8TDL5 484 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 E2F7Q96AV8 911 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 ELSPBP1Q96BH3 223 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 PGAP3Q96FM1 320 aaPredicted RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 BTBD6Q96KE9 485 aa15.94■□□□□ 0.14
SEC13-215ENST00000477547 FCRL2Q96LA5 508 aaPredicted RBP15.94■□□□□ 0.14
SEC13-215ENST00000477547 DOCK4Q8N1I0 1966 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 CACNA1HO95180 2353 aa15.93■□□□□ 0.14
SEC13-215ENST00000477547 A0A0A6YYK5 440 aaPredicted RBP15.93■□□□□ 0.14
SEC13-215ENST00000477547 TMEM110-MUSTN1A8MSY1 372 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms