RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 SAR1AQ9NR31 198 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 TAGLN3Q9UI15 199 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 PRG3Q9Y2Y8 225 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 A0A0A0MRY4 1105 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 PEX10O60683 326 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SMIM10L2AP0DMW4 78 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SMIM10L2BP0DMW5 78 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 VEPH1Q14D04 833 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 FAM83EQ2M2I3 478 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SPANXN3Q5MJ09 141 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 N4BP2L1Q5TBK1 243 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 TMEM86AQ8N2M4 240 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 PRCCQ92733 491 aaPredicted RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 WNT8BQ93098 351 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 SPATA13Q96N96 652 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 UBE2OQ9C0C9 1292 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 SARS2Q9NP81 518 aaKnown RBP15.06■□□□□ 0
HDAC6-220ENST00000477528 SNCAIPQ9Y6H5 919 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
HDAC6-220ENST00000477528 GSTA4O15217 222 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 PTPN1P18031 435 aaKnown RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 RAB27AP51159 221 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 ZNF135P52742 658 aaPredicted RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 ELF3P78545 371 aaPredicted RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 PDAP1Q13442 181 aaKnown RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 MGAT5BQ3V5L5 792 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 GRTP1Q5TC63 336 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 CHSY1Q86X52 802 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 DDIASQ8IXT1 998 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 LMO3Q8TAP4 145 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 EDEM1Q92611 657 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 MRPL1Q9BYD6 325 aaKnown RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 DRC3Q9H069 523 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 EIF4E1BA6NMX2 242 aaKnown RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 AIM2O14862 343 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 PARP6Q2NL67 630 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 ZC3H12AQ5D1E8 599 aaKnown RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 PPP1R26Q5T8A7 1209 aaPredicted RBP15.05■□□□□ 0
HDAC6-220ENST00000477528 CATSPER1Q8NEC5 780 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 RAET1EQ8TD07 263 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 PHACTR1Q9C0D0 580 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 ELOVL4Q9GZR5 314 aa15.05■□□□□ 0
HDAC6-220ENST00000477528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.05■□□□□ -0
HDAC6-220ENST00000477528 ENO3P13929 434 aaPredicted RBP15.05■□□□□ -0
HDAC6-220ENST00000477528 ESRRGP62508 458 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 MBTD1Q05BQ5 628 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 DRICH1Q6PGQ1 229 aaPredicted RBP15.05■□□□□ -0
HDAC6-220ENST00000477528 SLCO2A1Q92959 643 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 FAM124BQ9H5Z6 455 aaPredicted RBP15.05■□□□□ -0
HDAC6-220ENST00000477528 THAP1Q9NVV9 213 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 C10orf71Q711Q0 1435 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 KCNK1O00180 336 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 BNIP3LO60238 219 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 HADHAP40939 763 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 CDH17Q12864 832 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 RCN1Q15293 331 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 C10orf120Q5SQS8 335 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 GPR142Q7Z601 462 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 CPNE8Q86YQ8 564 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 TFAP2BQ92481 460 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 FAXDC2Q96IV6 333 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 RNPEPQ9H4A4 650 aa15.05■□□□□ -0
HDAC6-220ENST00000477528 MYH14Q7Z406 1995 aaKnown RBP15.05■□□□□ -0
HDAC6-220ENST00000477528 SLC15A5A6NIM6 579 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 FCHO1O14526 889 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 AKR1A1P14550 325 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 NPR3P17342 541 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 NOMO1Q15155 1222 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 TCEAL1Q15170 157 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 WASHC2DQ5SRD0 308 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 PDZD8Q8NEN9 1154 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 TEKT4Q8WW24 435 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 OXNAD1Q96HP4 312 aaPredicted RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 SENP8Q96LD8 212 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 ULBP1Q9BZM6 244 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 ARHGAP26Q9UNA1 814 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 GPR25O00155 361 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 EGFRP00533 1210 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 MYCP01106 439 aaPredicted RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 SERPINE1P05121 402 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 STMN1P16949 149 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 NPY2RP49146 381 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 FSCN1Q16658 493 aaKnown RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 SH3D19Q5HYK7 790 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 IL31Q6EBC2 164 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 KYAT3Q6YP21 454 aaKnown RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 RNF180Q86T96 592 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 PIGZQ86VD9 579 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 INPP5DQ92835 1189 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
HDAC6-220ENST00000477528 GLT1D1Q96MS3 346 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 FIZ1Q96SL8 496 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 VAT1Q99536 393 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 CPNE1Q99829 537 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 PDZD7Q9H5P4 517 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 RNF19AQ9NV58 838 aa15.04■□□□□ -0
HDAC6-220ENST00000477528 KCNH4Q9UQ05 1017 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms