RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 EPS15L1Q9UBC2 864 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 CRNNQ9UBG3 495 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 BCAP29Q9UHQ4 241 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 LGALS13Q9UHV8 139 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF180Q9UJW8 692 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 DNAJC12Q9UKB3 198 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ZMYND8Q9ULU4 1186 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 SORCS3Q9UPU3 1222 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 PRELID1Q9Y255 219 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 RABGAP1Q9Y3P9 1069 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF711Q9Y462 761 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 NRXN2Q9P2S2 1712 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 MYH8P13535 1937 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RTL9Q8NET4 1388 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 LAMB2P55268 1798 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 C10orf71Q711Q0 1435 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 A8MUI8 341 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 FAM47E-STBD1D6RA91 191 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 E9PMD0 336 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 H0YJX3 145 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 EIF3FO00303 357 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 LAD1O00515 517 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 FBP2O00757 339 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF213O14771 459 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF263O14978 683 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 FOXN1O15353 648 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RNF113AO15541 343 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZBTB43O43298 467 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 DENRO43583 198 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ADCY3O60266 1144 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CLEC3AO75596 197 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 PALMO75781 387 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 BBOX1O75936 387 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TGDSO95455 350 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 IL1BP01584 269 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ALOX5P09917 674 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 HSPA8P11142 646 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 M6PRP20645 277 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TACR2P21452 398 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 HOXD10P28358 340 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 HMOX2P30519 316 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CHRNA3P32297 505 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 S100A5P33763 92 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MAN1A1P33908 653 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SERPINB6P35237 376 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MTIF2P46199 727 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 PCYT1AP49585 367 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 NT5C2P49902 561 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MXI1P50539 228 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ATP6V0D1P61421 351 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RPS8P62241 208 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 NSUN2Q08J23 767 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MSLNQ13421 630 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 AUHQ13825 339 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SPARCL1Q14515 664 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ARHGEF6Q15052 776 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MAN2A1Q16706 1144 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF829Q3KNS6 432 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 WDR72Q3MJ13 1102 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RABL6Q3YEC7 729 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ANKRD20A4Q4UJ75 823 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 KHDC1Q4VXA5 237 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 HERC4Q5GLZ8 1057 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 EPHA10Q5JZY3 1008 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CDCP2Q5VXM1 449 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 STYK1Q6J9G0 422 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TTI2Q6NXR4 508 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 LRRC8BQ6P9F7 803 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SLC2A7Q6PXP3 512 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 KYAT3Q6YP21 454 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ANO5Q75V66 913 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SPRED1Q7Z699 444 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SLFN11Q7Z7L1 901 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ECHDC2Q86YB7 292 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 C2CD5Q86YS7 1000 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 KLHL7Q8IXQ5 586 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TMEM192Q8IY95 271 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 DIS3L2Q8IYB7 885 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SYNE4Q8N205 404 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MARVELD2Q8N4S9 558 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TTC9BQ8N6N2 239 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 GIMAP8Q8ND71 665 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MDM1Q8TC05 714 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MORC4Q8TE76 937 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RASSF5Q8WWW0 418 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 LPIN2Q92539 896 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ARHGEF2Q92974 986 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ERP27Q96DN0 273 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MED30Q96HR3 178 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RIOK1Q9BRS2 568 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 OSBPL6Q9BZF3 934 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CRNKL1Q9BZJ0 848 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 KLHL4Q9C0H6 718 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CSRNP2Q9H175 543 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 GBA3Q9H227 469 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 C1orf21Q9H246 121 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 BCAS3Q9H6U6 928 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF696Q9H7X3 374 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CNNM2Q9H8M5 875 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms