RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ANKRD62A6NC57 917 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 TMEM191CA6NGB0 347 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 TRDMT1O14717 391 aaKnown RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 IRAK2O43187 625 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 CYP1A2P05177 515 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 CORO1AP31146 461 aaKnown RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 SOX9P48436 509 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 COG7P83436 770 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 EML3Q32P44 896 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 DAB2IPQ5VWQ8 1189 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 NAIF1Q69YI7 327 aaPredicted RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 Q6ZNB5 142 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 BNIPLQ7Z465 357 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 TADA2BQ86TJ2 420 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 TMTC1Q8IUR5 882 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 YAF2Q8IY57 180 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 ADGRG2Q8IZP9 1017 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 ACRBPQ8NEB7 543 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 OSCP1Q8WVF1 389 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 E2F7Q96AV8 911 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 MYEOVQ96EZ4 313 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 BRD9Q9H8M2 597 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 FAM204AQ9H8W3 233 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 AGO1Q9UL18 857 aaKnown RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 HBS1LQ9Y450 684 aaKnown RBP16.53■□□□□ 0.24
COPS3-207ENST00000477299 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
COPS3-207ENST00000477299 E2F8A0AVK6 867 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 RCCD1A6NED2 376 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 CHADO15335 359 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 CCP110O43303 1012 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 NDUFA10O95299 355 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 LCA5LO95447 670 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 H2AFZP0C0S5 128 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 GPD1P21695 349 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 SLC25A52Q3SY17 297 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 NADSYN1Q6IA69 706 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 H2AFVQ71UI9 128 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 ARFGAP1Q8N6T3 406 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 DEPDC1BQ8WUY9 529 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 DESI2Q9BSY9 194 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 NUP85Q9BW27 656 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 HEBP1Q9NRV9 189 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 PARVAQ9NVD7 372 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 DUSP12Q9UNI6 340 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 TLR6Q9Y2C9 796 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 TECTAO75443 2155 aa16.52■□□□□ 0.24
COPS3-207ENST00000477299 SHISA7A6NL88 538 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 MOCS2O96007 188 aaPredicted RBP16.51■□□□□ 0.23
COPS3-207ENST00000477299 SRFP11831 508 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 SLC6A4P31645 630 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 MAGEA1P43355 309 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 IFNAR2P48551 515 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 ZXDAP98168 799 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 GAB4Q2WGN9 574 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 ARHGAP29Q52LW3 1261 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
COPS3-207ENST00000477299 RHBDF2Q6PJF5 856 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 ARCQ7LC44 396 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 FAM131BQ86XD5 332 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 TMEM25Q86YD3 366 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 LRRC8AQ8IWT6 810 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 PLD4Q96BZ4 506 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 PDLIM2Q96JY6 352 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 ZNF830Q96NB3 372 aaPredicted RBP16.51■□□□□ 0.23
COPS3-207ENST00000477299 SERPINB11Q96P15 392 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 OSGEPQ9NPF4 335 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 THG1LQ9NWX6 298 aaKnown RBP16.51■□□□□ 0.23
COPS3-207ENST00000477299 CA14Q9ULX7 337 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 PCDHA13Q9Y5I0 950 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 BDP1A6H8Y1 2624 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 MUC3AQ02505 3323 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 DOCK4Q8N1I0 1966 aa16.51■□□□□ 0.23
COPS3-207ENST00000477299 KCNU1A8MYU2 1149 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
COPS3-207ENST00000477299 TSPAN3O60637 253 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 ENDOD1O94919 500 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 CYP17A1P05093 508 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 MYBL1P10243 752 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 SDC4P31431 198 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 GGCXP38435 758 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 PTPN9P43378 593 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 CXCR3P49682 368 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 SGSHP51688 502 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 HDAC4P56524 1084 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 GSDMDP57764 484 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 CCZ1BP86790 482 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
COPS3-207ENST00000477299 DEUP1Q05D60 604 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 PPP1R2P3Q6NXS1 205 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 RFWD3Q6PCD5 774 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 TPGS1Q6ZTW0 290 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 DDX42Q86XP3 938 aaKnown RBP eCLIP16.5■□□□□ 0.23
COPS3-207ENST00000477299 FAM172AQ8WUF8 416 aa16.5■□□□□ 0.23
COPS3-207ENST00000477299 CENPIQ92674 756 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms