RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 HYAL3O43820 417 aaPredicted RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 NDUFS2O75306 463 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 GABBR2O75899 941 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 ZBED1O96006 694 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 SERPINF2P08697 491 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 HLA-EP13747 358 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 LCP1P13796 627 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 CSRP1P21291 193 aaKnown RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 PRKCHP24723 683 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 PSEN1P49768 467 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 RGS7P49802 495 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 SGSHP51688 502 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 COG7P83436 770 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 GFPT1Q06210 699 aaPredicted RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 ADIGQ0VDE8 80 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 DUOXA1Q1HG43 343 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 PEAR1Q5VY43 1037 aaPredicted RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 FAM124AQ86V42 546 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 FMNL3Q8IVF7 1028 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 DDI1Q8WTU0 396 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 TFAP2BQ92481 460 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 KAT5Q92993 513 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 TOE1Q96GM8 510 aaKnown RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 PIWIL1Q96J94 861 aaKnown RBP12.21□□□□□ -0.45
VARS2-208ENST00000477052 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 CIPCQ9C0C6 399 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 PRDM16Q9HAZ2 1276 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 CAPN10Q9HC96 672 aa12.21□□□□□ -0.45
VARS2-208ENST00000477052 PCDH15Q96QU1 1955 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 GOLGA6L7A0A1B0GV03 622 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 RNF225M0QZC1 329 aaPredicted RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 STX10O60499 249 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 CHKAP35790 457 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 ENPEPQ07075 957 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 SEMA3BQ13214 749 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ZNF234Q14588 700 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 PLEKHG6Q3KR16 790 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 SGO2Q562F6 1265 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ZNF658Q5TYW1 1059 aaPredicted RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 BSPRYQ5W0U4 402 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 UNQ6494/PRO21346Q6UXR6 183 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 PIP4P1Q86T03 277 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ZNF276Q8N554 614 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 CLEC4CQ8WTT0 213 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 TSG101Q99816 390 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ZSWIM1Q9BR11 485 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 GPR174Q9BXC1 333 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 DNAI2Q9GZS0 605 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 THAP10Q9P2Z0 257 aaPredicted RBP12.2□□□□□ -0.46
VARS2-208ENST00000477052 STRIP2Q9ULQ0 834 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 SLC27A6Q9Y2P4 619 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 ATP6V1DQ9Y5K8 247 aa12.2□□□□□ -0.46
VARS2-208ENST00000477052 GFRA2O00451 464 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ARHGAP33O14559 1287 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 ZNF217O75362 1048 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 EPHX1P07099 455 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 PROS1P07225 676 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 CD59P13987 128 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 HOXD9P28356 352 aaPredicted RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 CD6P30203 668 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 BCAT1P54687 386 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 STARD3Q14849 445 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 TRIP4Q15650 581 aaPredicted RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 PM20D1Q6GTS8 502 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 RFWD3Q6PCD5 774 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ANKS1BQ7Z6G8 1248 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 TMPRSS6Q8IU80 811 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ZC3H3Q8IXZ2 948 aaKnown RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 UBR7Q8N806 425 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ENGASEQ8NFI3 743 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ZNF419Q96HQ0 510 aaPredicted RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 IPO9Q96P70 1041 aaKnown RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 CDK5RAP1Q96SZ6 601 aaKnown RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 ADAM33Q9BZ11 813 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 UBXN6Q9BZV1 441 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 RMND1Q9NWS8 449 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 HESX1Q9UBX0 185 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ARMCX3Q9UH62 379 aaPredicted RBP12.19□□□□□ -0.46
VARS2-208ENST00000477052 KLK13Q9UKR3 277 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 ZNF510Q9Y2H8 683 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 COQ4Q9Y3A0 265 aa12.19□□□□□ -0.46
VARS2-208ENST00000477052 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms