RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SIMC1Q8NDZ2 872 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 CATSPER1Q8NEC5 780 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PI4K2BQ8TCG2 481 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 NCLNQ969V3 563 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 RMND5BQ96G75 393 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 PAGE5Q96GU1 130 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 WNK4Q96J92 1243 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 LLPHQ9BRT6 129 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 TMEM79Q9BSE2 394 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 NOC4LQ9BVI4 516 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 CADM1Q9BY67 442 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 IL25Q9H293 177 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 OR51B5Q9H339 312 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 Q9H521 79 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ACAD9Q9H845 621 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 SP110Q9HB58 689 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 GPAMQ9HCL2 828 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 TIGARQ9NQ88 270 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD55-208ENST00000476590 KBTBD4Q9NVX7 518 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ENOPH1Q9UHY7 261 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 CDH7Q9ULB5 785 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 DIMT1Q9UNQ2 313 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 VWA7Q9Y334 891 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 MROH7-TTC4A0A0A0MT08 1334 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ZNF804BA4D1E1 1349 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 WDR91A4D1P6 747 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SLC35F4A4IF30 521 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SYNDIG1LA6NDD5 238 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 LRRIQ4A6NIV6 560 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 C16orf96A6NNT2 1141 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 KLRF2D3W0D1 207 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 H3BNX3 289 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 BTN3A1O00481 513 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ZBTB39O15060 712 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SMAD7O15105 426 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 GSC2O15499 205 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 DENRO43583 198 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 BUD23O43709 281 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 FKBP6O75344 327 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PIGNO95427 931 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 CD48P09326 243 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 NUDT17P0C025 328 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 KRT3P12035 628 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SELLP14151 372 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PCSK2P16519 638 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ITIH1P19827 911 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 NR4A1P22736 598 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 DNAJB1P25685 340 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PON1P27169 355 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PMLP29590 882 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ECHS1P30084 290 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 L1CAMP32004 1257 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 BTDP43251 543 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SYKP43405 635 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ABCG1P45844 678 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SLCO1A2P46721 670 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 EIF1AXP47813 144 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 HARS2P49590 506 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 CACNB3P54284 484 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 IRX4P78413 519 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PURAQ00577 322 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 CREB5Q02930 508 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 KRT17Q04695 432 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 LRRC63Q05C16 580 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 THOC5Q13769 683 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 TNFAIP8L3Q5GJ75 292 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SLC10A5Q5PT55 438 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 SCARA3Q6AZY7 606 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 IGF2-ASQ6U949 168 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 TMC3Q7Z5M5 1100 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 USP37Q86T82 979 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 TTC7BQ86TV6 843 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 TSPYL5Q86VY4 417 aaPredicted RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 CCDC36Q8IYA8 594 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 RTKN2Q8IZC4 609 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 SLC4A11Q8NBS3 891 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 NCOA7Q8NI08 942 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 CKAP2Q8WWK9 683 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 MCUR1Q96AQ8 359 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 THAP11Q96EK4 314 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 C11orf24Q96F05 449 aaPredicted RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 SLC29A1Q99808 456 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 BTBD10Q9BSF8 475 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ZSCAN5AQ9BUG6 496 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 EMILIN2Q9BXX0 1053 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 NARFLQ9H6Q4 476 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 EPS8L2Q9H6S3 715 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ERVMER34-1Q9H9K5 563 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 CYP4F11Q9HBI6 524 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ALG13Q9NP73 1137 aaKnown RBP4.27□□□□□ -1.73
CD55-208ENST00000476590 POLE3Q9NRF9 147 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 FAM105AQ9NUU6 356 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 GDAP2Q9NXN4 497 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 ADAMTS1Q9UHI8 967 aa4.27□□□□□ -1.73
CD55-208ENST00000476590 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms