RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 DDIASQ8IXT1 998 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PPIL6Q8IXY8 311 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 TRIML2Q8N7C3 387 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 GBP7Q8N8V2 638 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 C18orf25Q96B23 403 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PGM2Q96G03 612 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 HAUS8Q9BT25 410 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 SPON2Q9BUD6 331 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 RANBP17Q9H2T7 1088 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 AAASQ9NRG9 546 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 COL24A1Q17RW2 1714 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 GVINP1Q7Z2Y8 2422 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 CASTOR2A6NHX0 329 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 LACTBL1A8MY62 500 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 ERBB2P04626 1255 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 NCAM1P13591 858 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PRKAR2AP13861 404 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 TUBP50607 506 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 MAP3K7CLP57077 242 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 MGAT5Q09328 741 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 USP10Q14694 798 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 RBBP5Q15291 538 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 KLHL38Q2WGJ6 581 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 SGO1Q5FBB7 561 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 LRRC8EQ6NSJ5 796 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 DNAJC14Q6Y2X3 702 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 MIB1Q86YT6 1006 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 HPS6Q86YV9 775 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 KHSRPQ92945 711 aaKnown RBP eCLIP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF317Q96PQ6 595 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 NDNQ99608 321 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC90BQ9GZT6 254 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 ARMC7Q9H6L4 198 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 IARS2Q9NSE4 1012 aaKnown RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 NMRK1Q9NWW6 199 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 FAF1Q9UNN5 650 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-204ENST00000476379 PTCH2Q9Y6C5 1203 aa5.15□□□□□ -1.59
CCDC39-204ENST00000476379 MYH1P12882 1939 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SYNDIG1LA6NDD5 238 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 C9IYK1 514 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PPEF2O14830 753 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MICAL2O94851 1124 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 JCHAINP01591 159 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 KRT7P08729 469 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GZMAP12544 262 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 INSRRP14616 1297 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 HNRNPLP14866 589 aaKnown RBP eCLIP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 ARSAP15289 507 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 UBA1P22314 1058 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SFNP31947 248 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CCL23P55773 120 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GJA9P57773 515 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM132DQ14C87 1099 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CNGA3Q16281 694 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CCNG2Q16589 344 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DBN1Q16643 649 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM198Q66K66 360 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SLFN12LQ6IEE8 588 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DEFB128Q7Z7B8 93 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TRABD2AQ86V40 505 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TTC30BQ8N4P2 665 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MREGQ8N565 214 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 OR52K1Q8NGK4 314 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GRIP2Q9C0E4 1043 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 ADAM7Q9H2U9 754 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 COPS7BQ9H9Q2 264 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 STXBP5LQ9Y2K9 1186 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 DIS3Q9Y2L1 958 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PRG3Q9Y2Y8 225 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MYH4Q9Y623 1939 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 RNF103-CHMP3A0A140T963 221 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MOXD2PA6NHM9 499 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 STX16-NPEPL1H3BU86 382 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 P4HA1P13674 534 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GOT1P17174 413 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PBX3P40426 434 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MAXP61244 160 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PTPN11Q06124 597 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PPP1R8Q12972 351 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SREK1Q8WXA9 508 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SLC45A3Q96JT2 553 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 FSD1LQ9BXM9 530 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PAPOLBQ9NRJ5 636 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 WHRNQ9P202 907 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 MCM8Q9UJA3 840 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GRID1Q9ULK0 1009 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 STK24Q9Y6E0 443 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 A0A0A6YYK5 440 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 A0A1B0GVG6 124 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 SAC3D1A6NKF1 404 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 C2CD2LO14523 706 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TPP1O14773 563 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 FOXD2O60548 495 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 LRCH4O75427 683 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 RGS20O76081 388 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 LUC7L3O95232 432 aaKnown RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 GPD1P21695 349 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 TBXAS1P24557 533 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-204ENST00000476379 CYP2F1P24903 491 aa5.14□□□□□ -1.59
CCDC39-204ENST00000476379 PPM1FP49593 454 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms