RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CCP110O43303 1012 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 ENDOD1O94919 500 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 KLKB1P03952 638 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 ATP11AP98196 1134 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 ZNF252P-AS1Q0IIN9 211 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 NME3Q13232 169 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 GRM2Q14416 872 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 Q6ZNB5 142 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 HTR3DQ70Z44 454 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 STRADAQ7RTN6 431 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 SLC44A3Q8N4M1 653 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 TTC16Q8NEE8 873 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 RFFLQ8WZ73 363 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 CENPIQ92674 756 aaPredicted RBP23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 CNPY3Q9BT09 278 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 PIGVQ9NUD9 493 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 CTTNBP2NLQ9P2B4 639 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 LSM7Q9UK45 103 aaKnown RBP23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 TFR2Q9UP52 801 aa23.08■■□□□ 1.29
MCF2L2-209ENST00000475664 SYNJ2BP-COX16A0A087WUM0 186 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 NRDCO43847 1150 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 VAV2P52735 878 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 KRT83P78385 493 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 DEUP1Q05D60 604 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 TCEAL1Q15170 157 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 SH3PXD2AQ5TCZ1 1133 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 ZNF564Q8TBZ8 553 aaPredicted RBP23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 NECAB3Q96P71 396 aaPredicted RBP23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 DCLK3Q9C098 648 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 KCNF1Q9H3M0 494 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 CD320Q9NPF0 282 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 COX16Q9P0S2 106 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 ANAPC7Q9UJX3 599 aa23.07■■□□□ 1.28
MCF2L2-209ENST00000475664 RCCD1A6NED2 376 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 SCAMP3O14828 347 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 MTA2O94776 668 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 F9P00740 461 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 PSMA2P25787 234 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 CORO1AP31146 461 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 RDXP35241 583 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 CXCR3P49682 368 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 ATXN1P54253 815 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 PPP2R5DQ14738 602 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 CDO1Q16878 200 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 RAB6CQ53S08 254 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 ZC3H12AQ5D1E8 599 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 NUGGCQ68CJ6 796 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 RHOT2Q8IXI1 618 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 YAF2Q8IY57 180 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 GJD3Q8N144 294 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 SLC35G2Q8TBE7 412 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 FAM172AQ8WUF8 416 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 ASIC4Q96FT7 647 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 TRMT61BQ9BVS5 477 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 RAB6CQ9H0N0 254 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 OSGEPQ9NPF4 335 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 TMEM51Q9NW97 253 aa23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 THG1LQ9NWX6 298 aaKnown RBP23.06■■□□□ 1.28
MCF2L2-209ENST00000475664 COL4A2P08572 1712 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 CHADO15335 359 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 HARS2P49590 506 aaKnown RBP23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 HDAC4P56524 1084 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 TDGQ13569 410 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 ARHGAP29Q52LW3 1261 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 CC2D1AQ6P1N0 951 aaPredicted RBP23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 RNF135Q8IUD6 432 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 UNC45BQ8IWX7 931 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 BBS7Q8IWZ6 715 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 OSCP1Q8WVF1 389 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 FAM83CQ9BQN1 747 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 AGO1Q9UL18 857 aaKnown RBP23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 ADGRG1Q9Y653 693 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 WNT6Q9Y6F9 365 aa23.05■■□□□ 1.28
MCF2L2-209ENST00000475664 KCNU1A8MYU2 1149 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 SLC9A3R1O14745 358 aaPredicted RBP23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 PJA2O43164 708 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 LATS1O95835 1130 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 APOEP02649 317 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 SLC2A3P11169 496 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 GDI1P31150 447 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 CCR1P32246 355 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 SND1Q7KZF4 910 aaKnown RBP eCLIP23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 KIAA1328Q86T90 577 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 DENND1CQ8IV53 801 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 AZIN2Q96A70 460 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 ZFYVE19Q96K21 471 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 BTBD6Q96KE9 485 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 DUS2Q9NX74 493 aaKnown RBP23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 TBC1D14Q9P2M4 693 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 IP6K2Q9UHH9 426 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 ZNF510Q9Y2H8 683 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 TICRRQ7Z2Z1 1910 aa23.04■■□□□ 1.28
MCF2L2-209ENST00000475664 A0A0A6YYK5 440 aaPredicted RBP23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 ARNTLO00327 626 aa23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 DESP17661 470 aa23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 IFNAR2P48551 515 aa23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 PDGFRLQ15198 375 aa23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 EML3Q32P44 896 aa23.03■■□□□ 1.28
MCF2L2-209ENST00000475664 BRMS1LQ5PSV4 323 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms