RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SEC24AO95486 1093 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 ITGAVP06756 1048 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CTSAP10619 480 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 ATF2P15336 505 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 IL4RP24394 825 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CTNNB1P35222 781 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CARSP49589 748 aaKnown RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 ZNF135P52742 658 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 TAF10Q12962 218 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 MTMR3Q13615 1198 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 BRMS1LQ5PSV4 323 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 PQLC3Q8N755 202 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 KLHL23Q8NBE8 558 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 SLC35B2Q8TB61 432 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 ACTL9Q8TC94 416 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 AENQ8WTP8 325 aaKnown RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 P3H4Q92791 437 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 RNF34Q969K3 372 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 SERPINB11Q96P15 392 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CSPG4P5Q96PW8 444 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 TRIM31Q9BZY9 425 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 WDCPQ9H6R7 721 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CYP4F11Q9HBI6 524 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 RXFP1Q9HBX9 757 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 CLIC5Q9NZA1 410 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 DRG1Q9Y295 367 aaKnown RBP14.25□□□□□ -0.13
TRAF4-210ENST00000475329 RWDD3Q9Y3V2 267 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 YIPF1Q9Y548 306 aa14.25□□□□□ -0.13
TRAF4-210ENST00000475329 PRRG1O14668 218 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 PECAM1P16284 738 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 ELF1P32519 619 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 CA8P35219 290 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 ALDH1A3P47895 512 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 PGFP49763 221 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 DRG2P55039 364 aaKnown RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 EIF3EP60228 445 aaKnown RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 VEPH1Q14D04 833 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 NOMO1Q15155 1222 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 OASLQ15646 514 aaKnown RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 EMBQ6PCB8 327 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 GSTA5Q7RTV2 222 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 PYROXD2Q8N2H3 581 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 PDZD8Q8NEN9 1154 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 OVCA2Q8WZ82 227 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 DPF3Q92784 378 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 CASP10Q92851 521 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 TKTL2Q9H0I9 626 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 TMPRSS4Q9NRS4 437 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 OSER1Q9NX31 292 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 CWC15Q9P013 229 aaKnown RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 ASIC3Q9UHC3 531 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 NFU1Q9UMS0 254 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 MAGED2Q9UNF1 606 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-210ENST00000475329 ZNF148Q9UQR1 794 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 LZTS1Q9Y250 596 aa14.24□□□□□ -0.13
TRAF4-210ENST00000475329 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 EEF2KO00418 725 aaKnown RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 TEX28O15482 410 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 LILRB3O75022 631 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 CSH1P0DML2 217 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 CSH2P0DML3 217 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 RARGP13631 454 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 GOT1P17174 413 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 CCR1P32246 355 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 BMPR1AP36894 532 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 SEMA3BQ13214 749 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 NNTQ13423 1086 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 EIF4EBP2Q13542 120 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 TRADDQ15628 312 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 NPNTQ6UXI9 565 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 MTERF4Q7Z6M4 381 aaKnown RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 DDX42Q86XP3 938 aaKnown RBP eCLIP14.23□□□□□ -0.133e-8■■■□□ 16.5
TRAF4-210ENST00000475329 TCEAL8Q8IYN2 117 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 ALLCQ8N6M5 410 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 PLD5Q8N7P1 536 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 CCHCR1Q8TD31 782 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 CDK5RAP1Q96SZ6 601 aaKnown RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 EPAS1Q99814 870 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 MAGEB5Q9BZ81 275 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 ZNF446Q9NWS9 450 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 SAE1Q9UBE0 346 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-210ENST00000475329 SFMBT1Q9UHJ3 866 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 SNX24Q9Y343 169 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
TRAF4-210ENST00000475329 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-210ENST00000475329 SGK1O00141 431 aa14.22□□□□□ -0.13
TRAF4-210ENST00000475329 MSI1O43347 362 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms