RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ATP6V1C1P21283 382 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 ANXA11P50995 505 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 KPNA1P52294 538 aaPredicted RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 PLK1P53350 603 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 ZNF280DQ6N043 979 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 APBA2Q99767 749 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 SOX13Q9UN79 622 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 AMPD1P23109 780 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 TBX4P57082 545 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 TCHHL1Q5QJ38 904 aaPredicted RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 FAR2Q96K12 515 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 DRG1Q9Y295 367 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 N6AMT1Q9Y5N5 214 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 DOK6Q6PKX4 331 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 BNC2Q6ZN30 1099 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 EXD1Q8NHP7 514 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 ACTL9Q8TC94 416 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 USP6NLQ92738 828 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 SEPT3Q9UH03 358 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 CRYL1Q9Y2S2 319 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 MGAT1P26572 445 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 CLK2P49760 499 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 CCT8P50990 548 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 TYW3Q6IPR3 259 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 MTSS1LQ765P7 747 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 SLC5A5Q92911 643 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SLC1A6P48664 564 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SLC30A9Q6PML9 568 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 OR8H2Q8N162 312 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 UTP15Q8TED0 518 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 KBTBD4Q9NVX7 518 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 CTNNAL1Q9UBT7 734 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 MEI4A8MW99 385 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 SCAMP3O14828 347 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 GJB6O95452 261 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SNRNP27Q8WVK2 155 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 FIG4Q92562 907 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 SYT15Q9BQS2 421 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 NFICP08651 508 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 NQO1P15559 274 aaKnown RBP11.24□□□□□ -0.61
VAPB-204ENST00000475243 SOX6P35712 828 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 LACRTQ9GZZ8 138 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 BDNFP23560 247 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 PPATQ06203 517 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 VAC14Q08AM6 782 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 CRYMQ14894 314 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 GLT6D1Q7Z4J2 308 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 SYTL1Q8IYJ3 562 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 PARVBQ9HBI1 364 aa11.24□□□□□ -0.61
VAPB-204ENST00000475243 KCNK1O00180 336 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 HOXA2O43364 376 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 RAMP2O60895 175 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 TSC22D2O75157 780 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 KRT75O95678 551 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ADORA2AP29274 412 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 KRT20P35900 424 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SGCGQ13326 291 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 POM121L1PQ3SYA9 428 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FRMD8P1Q9BZ68 369 aaPredicted RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 NCKIPSDQ9NZQ3 722 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 FAM153AQ9UHL3 310 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SNCAIPQ9Y6H5 919 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 CPS1P31327 1500 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 LACTBL1A8MY62 500 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 TPBGLP0DKB5 382 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 RARGP13631 454 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 NOS3P29474 1203 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 PEX5P50542 639 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ITGA9Q13797 1035 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 NCF4Q15080 339 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 OTUD3Q5T2D3 398 aaPredicted RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 RIPOR1Q6ZS17 1223 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 C3orf20Q8ND61 904 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 NDOR1Q9UHB4 597 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 ITGA11Q9UKX5 1188 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 PROSCO94903 275 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 YWHAQP27348 245 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 HNRNPH1P31943 449 aaKnown RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 EIF2B5Q13144 721 aaKnown RBP11.23□□□□□ -0.61
VAPB-204ENST00000475243 ZCWPW2Q504Y3 356 aa11.23□□□□□ -0.61
VAPB-204ENST00000475243 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms