RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 CPT1BQ92523 772 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 MCRS1Q96EZ8 462 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 FAR2Q96K12 515 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 MACROD1Q9BQ69 325 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 VPS16Q9H269 839 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 VPS45Q9NRW7 570 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 DAPP1Q9UN19 280 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 C19orf53Q9UNZ5 99 aaPredicted RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 CNTN6Q9UQ52 1028 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 UBE2J1Q9Y385 318 aaPredicted RBP4.69□□□□□ -1.66
SDHB-204ENST00000475049 ENTPD2Q9Y5L3 495 aa4.69□□□□□ -1.66
SDHB-204ENST00000475049 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 H0Y3Z8 333 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 GCATO75600 419 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 LARGE1O95461 756 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 SLPIP03973 132 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 SLC3A2P08195 630 aaKnown RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 HSD3B1P14060 373 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 GPD1P21695 349 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 CST5P28325 142 aaPredicted RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 GALNSP34059 522 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 MAPK9P45984 424 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 AARSP49588 968 aaKnown RBP eCLIP4.68□□□□□ -1.66
SDHB-204ENST00000475049 JAK3P52333 1124 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 PRKAA2P54646 552 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 CUL4BQ13620 913 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 TAF12Q16514 161 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 RNASE12Q5GAN4 147 aaKnown RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 TMEM65Q6PI78 240 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 OLFML1Q6UWY5 402 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 TRIM72Q6ZMU5 477 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 MOGAT3Q86VF5 341 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 ARHGEF25Q86VW2 580 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 SUGP1Q8IWZ8 645 aaKnown RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 FTSJ3Q8IY81 847 aaKnown RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 AMER2Q8N7J2 671 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 GPR150Q8NGU9 434 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 OR6Y1Q8NGX8 325 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 MAFAQ8NHW3 353 aaPredicted RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 CSGALNACT1Q8TDX6 532 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 GCC1Q96CN9 775 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 UROC1Q96N76 676 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 THAP7Q9BT49 309 aaPredicted RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 LIN7CQ9NUP9 197 aaKnown RBP4.68□□□□□ -1.66
SDHB-204ENST00000475049 RAB21Q9UL25 225 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 GPR52Q9Y2T5 361 aa4.68□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3DA0A087WVF3 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3IA0A087WXS9 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3EA0A087X179 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3KA0A087X1G2 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3BA6NDS4 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A18PA6NE21 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3FA6NER0 549 aaPredicted RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A16PA6NEW6 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A9PA6NNJ1 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A5PA8MXJ8 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3LB9A6J9 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 M0QYT0 321 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 CYR61O00622 381 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 PRAMEF2O60811 474 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 JTBO76095 146 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 C1RP00736 705 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A15PP0C7V4 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 FAM90A14PP0C7W9 464 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3HP0C7X1 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 ITPKBP27987 946 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 SERPINA4P29622 427 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 ADD2P35612 726 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 SOX10P56693 466 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 GPC5P78333 572 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 RAE1P78406 368 aaKnown RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 HOXA4Q00056 320 aaPredicted RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 DPTQ07507 201 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3GQ6DHY5 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3CQ6IPX1 549 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 SYNE3Q6ZMZ3 975 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 RINLQ6ZS11 566 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 C2CD5Q86YS7 1000 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TBC1D3Q8IZP1 549 aaPredicted RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 SIMC1Q8NDZ2 872 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 OR52L2PQ8NGH6 319 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 RILPL2Q969X0 211 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 CCDC17Q96LX7 622 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 SNX18Q96RF0 628 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 PAAF1Q9BRP4 392 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 MECRQ9BV79 373 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 ADGRE3Q9BY15 652 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 NDUFAF4Q9P032 175 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 BAG5Q9UL15 447 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TRPC5Q9UL62 973 aaPredicted RBP4.67□□□□□ -1.66
SDHB-204ENST00000475049 WNT6Q9Y6F9 365 aa4.67□□□□□ -1.66
SDHB-204ENST00000475049 TTC34A8MYJ7 566 aa4.66□□□□□ -1.66
SDHB-204ENST00000475049 E7EVH7 732 aa4.66□□□□□ -1.66
SDHB-204ENST00000475049 SMIM22K7EJ46 135 aa4.66□□□□□ -1.66
SDHB-204ENST00000475049 M0QZQ0 153 aa4.66□□□□□ -1.66
SDHB-204ENST00000475049 EIF3FO00303 357 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms