RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TOGARAM2Q6ZUX3 1019 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 BHLHA9Q7RTU4 235 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 TRMT11Q7Z4G4 463 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 FMNL3Q8IVF7 1028 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 PGBD3Q8N328 593 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 MDGA1Q8NFP4 955 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 SLC35F5Q8WV83 523 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 GOLGA1Q92805 767 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 KREMEN1Q96MU8 473 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 MED15Q96RN5 788 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 ZSWIM1Q9BR11 485 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 MIS12Q9H081 205 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 ARRDC1-AS1Q9H2J1 176 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 CNGB3Q9NQW8 809 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 ST7Q9NRC1 585 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 ABCC13Q9NSE7 274 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 SEMA4GQ9NTN9 838 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 MARK1Q9P0L2 795 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 SFMBT1Q9UHJ3 866 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 AGO1Q9UL18 857 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.86□□□□□ -0.83
PDPN-204ENST00000475043 FAM186AA6NE01 2351 aa9.86□□□□□ -0.83
PDPN-204ENST00000475043 TCRBV21S2A2A0A5A6 115 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 PRR5-ARHGAP8B1AHC4 643 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 MED7O43513 233 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 LRP3O75074 770 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ADAM23O75077 832 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 LETM1O95202 739 aaPredicted RBP9.85□□□□□ -0.83
PDPN-204ENST00000475043 HNRNPLP14866 589 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDPN-204ENST00000475043 SLC9A1P19634 815 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 TGM1P22735 817 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 WASP42768 502 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ZNF132P52740 706 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ARHGAP8P85298 464 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDPN-204ENST00000475043 CCDC6Q16204 474 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 CSRP2Q16527 193 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ARHGAP44Q17R89 818 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 DPCR1Q3MIW9 517 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 HSP90AA4PQ58FG1 418 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 SDE2Q6IQ49 451 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 GJB7Q6PEY0 223 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 GBP6Q6ZN66 633 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ENOSF1Q7L5Y1 443 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 RASSF3Q86WH2 238 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 CHPFQ8IZ52 775 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 CLEC4CQ8WTT0 213 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 DDI1Q8WTU0 396 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 HMGB4Q8WW32 186 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ERLEC1Q96DZ1 483 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 LOXL4Q96JB6 756 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 ZC3H10Q96K80 434 aaKnown RBP9.85□□□□□ -0.83
PDPN-204ENST00000475043 DUSP15Q9H1R2 295 aaPredicted RBP9.85□□□□□ -0.83
PDPN-204ENST00000475043 DACH1Q9UI36 760 aa9.85□□□□□ -0.83
PDPN-204ENST00000475043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 PRRT4C9JH25 899 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 PES1O00541 588 aaKnown RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 ZBTB24O43167 697 aaPredicted RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 MSI1O43347 362 aaKnown RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 THAP12O43422 761 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 RHOBTB1O94844 696 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 FBXO21O94952 628 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 LTFP02788 710 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 NCAM1P13591 858 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 HOXB2P14652 356 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 SDHBP21912 280 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 GNA15P30679 374 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 NTSR1P30989 418 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 APBA1Q02410 837 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 CREB5Q02930 508 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 EXOC3L4Q17RC7 722 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 PLK5Q496M5 336 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 FYB2Q5VWT5 728 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 EGFLAMQ63HQ2 1017 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 PRR23CQ6ZRP0 262 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 DGLUCYQ7Z3D6 616 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 IRF2BP1Q8IU81 584 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 SCML4Q8N228 414 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 C12orf50Q8NA57 414 aaPredicted RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 ZNF606Q8WXB4 792 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 RLN3Q8WXF3 142 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 IRGQQ8WZA9 623 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 HSFY1Q96LI6 401 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 FAM81BQ96LP2 452 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 ACOX2Q99424 681 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 THAP9Q9H5L6 903 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 ACP6Q9NPH0 428 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 CNTN6Q9UQ52 1028 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 STARD13Q9Y3M8 1113 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 HBS1LQ9Y450 684 aaKnown RBP9.84□□□□□ -0.83
PDPN-204ENST00000475043 THADAQ6YHU6 1953 aa9.84□□□□□ -0.83
PDPN-204ENST00000475043 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
PDPN-204ENST00000475043 SPAG17Q6Q759 2223 aa9.83□□□□□ -0.84
PDPN-204ENST00000475043 PTPRZ1P23471 2315 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms