RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ADRA1BP35368 520 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 COILP38432 576 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 HCAR3P49019 387 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 GPR15P49685 360 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PGFP49763 221 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SULT1E1P49888 294 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 ATXN1P54253 815 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 USP46P62068 366 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 ATP11AP98196 1134 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DHX34Q14147 1143 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DPYSL3Q14195 570 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PPP2R5DQ14738 602 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 BRD3Q15059 726 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 CA9Q16790 459 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KCNT1Q5JUK3 1230 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 BRMS1LQ5PSV4 323 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 TEX35Q5T0J7 233 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SPOUT1Q5T280 376 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SLC9A4Q6AI14 798 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 FAM117BQ6P1L5 589 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 TTC27Q6P3X3 843 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KLHDC10Q6PID8 442 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 CCNI2Q6ZMN8 369 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SYDE1Q6ZW31 735 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 MAP7D3Q8IWC1 876 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SCN4BQ8IWT1 228 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 VPS52Q8N1B4 723 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC26Q8TAB7 109 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SLC35B2Q8TB61 432 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DQX1Q8TE96 717 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 HDAC7Q8WUI4 952 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 FAM149B1Q96BN6 582 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SLC39A13Q96H72 371 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SAMD11Q96NU1 681 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PGLYRP2Q96PD5 576 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 RNF157Q96PX1 679 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PNKPQ96T60 521 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KRT12Q99456 494 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 AP1M1Q9BXS5 423 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DCLK3Q9C098 648 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DDX47Q9H0S4 455 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SMOC2Q9H3U7 446 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PIGVQ9NUD9 493 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 OSER1Q9NX31 292 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 ARHGEF38Q9NXL2 777 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 PCSK1NQ9UHG2 260 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DMGDHQ9UI17 866 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 DRG1Q9Y295 367 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 V9GYY5 206 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 RANBP2P49792 3224 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 A0A1W2PQH9 124 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 LRRD1A4D1F6 860 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 SLC38A8A6NNN8 435 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 KCNU1A8MYU2 1149 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PI4K2BG5E9Z4 385 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 RAD51CO43502 376 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 LIASO43766 372 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 IGLV3-27P01718 113 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CNPP09543 421 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CSH1P0DML2 217 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CSH2P0DML3 217 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 NCAM1P13591 858 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 KRT10P13645 584 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 RPL17P18621 184 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 MCM3P25205 808 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 HOXC13P31276 330 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 HTR7P34969 479 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PPP3CCP48454 512 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 TUBP50607 506 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CDH6P55285 790 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ERVK-21P61565 698 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 DEUP1Q05D60 604 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 RING1Q06587 406 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CBLBQ13191 982 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 MTA1Q13330 715 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 TFDP2Q14188 446 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 OASLQ15646 514 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CDO1Q16878 200 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 SMTNL2Q2TAL5 461 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 MGAT5BQ3V5L5 792 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 BTBD8Q5XKL5 378 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 DUPD1Q68J44 220 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 C8orf74Q6P047 294 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 TAC4Q86UU9 113 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 DEFB123Q8N688 67 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC185Q8N715 623 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms