RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SLC12A8A0AV02 714 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 GOLGA6L9A6NEM1 432 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TMEM110-MUSTN1A8MSY1 372 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 KCNU1A8MYU2 1149 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 I6L893 689 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 IRAK2O43187 625 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 MSI1O43347 362 aaKnown RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 GREM1O60565 184 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 F9P00740 461 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 IGLV3-27P01718 113 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 KCNA5P22460 613 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 IL1R2P27930 398 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 WEE1P30291 646 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 MIPP30301 263 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 RDXP35241 583 aaKnown RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 PCK1P35558 622 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 MTHFRP42898 656 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 SLC1A1P43005 524 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TAS2R40P59535 323 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 DEUP1Q05D60 604 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 NME3Q13232 169 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TRIP4Q15650 581 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 CDO1Q16878 200 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 ZC3H12AQ5D1E8 599 aaKnown RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TXNRD3NBQ6F5E7 133 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 CYP4V2Q6ZWL3 525 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TADA2BQ86TJ2 420 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 NT5DC3Q86UY8 548 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 MIB1Q86YT6 1006 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 NPAS3Q8IXF0 933 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 CMTM8Q8IZV2 173 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 FGF13Q92913 245 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 CD101Q93033 1021 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 HLA-CQ95604 372 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 FCRL2Q96LA5 508 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 GCNAQ96QF7 691 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 SMG9Q9H0W8 520 aaKnown RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 POMKQ9H5K3 350 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 FAM204AQ9H8W3 233 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 TRPC7Q9HCX4 862 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 DDIT4Q9NX09 232 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 RASAL2Q9UJF2 1139 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 USTQ9Y2C2 406 aa10.42□□□□□ -0.74
COL8A1-206ENST00000474648 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-206ENST00000474648 SYNJ2BP-COX16A0A087WUM0 186 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 MBTPS2O43462 519 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 RNF8O76064 485 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 KLKB1P03952 638 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 MBL2P11226 248 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 GBP1P32455 592 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 KCNQ1P51787 676 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 TBX4P57082 545 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 SLC25A11Q02978 314 aaKnown RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 NNTQ13423 1086 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ARHGAP15Q53QZ3 475 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ZNF569Q5MCW4 686 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ARTNQ5T4W7 220 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 DAAM2Q86T65 1068 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ARID3BQ8IVW6 561 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 USP13Q92995 863 aaPredicted RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 NECTIN4Q96NY8 510 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 SERPINB11Q96P15 392 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 LRRC3BQ96PB8 259 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 PEBP4Q96S96 227 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 MYADMQ96S97 322 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 MAGEB5Q9BZ81 275 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ARHGEF38Q9NXL2 777 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 GDE1Q9NZC3 331 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 COX16Q9P0S2 106 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 PCSK1NQ9UHG2 260 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ZMYM5Q9UJ78 669 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 ARHGAP26Q9UNA1 814 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 CCL26Q9Y258 94 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 TLR6Q9Y2C9 796 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 HBS1LQ9Y450 684 aaKnown RBP10.41□□□□□ -0.74
COL8A1-206ENST00000474648 CPQQ9Y646 472 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 BRWD1Q9NSI6 2320 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 DOCK6Q96HP0 2047 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 MYH10P35580 1976 aa10.41□□□□□ -0.74
COL8A1-206ENST00000474648 LEFTY2O00292 366 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 FANCGO15287 622 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 KIF5CO60282 957 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 STC2O76061 302 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 PRAMEF12O95522 483 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 FTCDO95954 541 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 CKMP06732 381 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 HMBSP08397 361 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 TCF3P15923 654 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 ADRA1BP35368 520 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 PEX5P50542 639 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 KPNA1P52294 538 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-206ENST00000474648 COG7P83436 770 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 RING1Q06587 406 aa10.4□□□□□ -0.74
COL8A1-206ENST00000474648 SMAD4Q13485 552 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms