RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SPARCL1Q14515 664 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 MFSD13AQ14CX5 517 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 PUM3Q15397 648 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 ARHGAP15Q53QZ3 475 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 ATPAF1Q5TC12 328 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 CCDC144NLQ6NUI1 221 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 KRT27Q7Z3Y8 459 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 PNLDC1Q8NA58 520 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 ADPRHL1Q8NDY3 354 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 CRB3Q9BUF7 120 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 C1QTNF7Q9BXJ2 289 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 USP29Q9HBJ7 922 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 ERVK-5Q9HDB9 667 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 KCNK9Q9NPC2 374 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 GJB4Q9NTQ9 266 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 TAGLN3Q9UI15 199 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 CDC23Q9UJX2 597 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 DAAM1Q9Y4D1 1078 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 PCDHB7Q9Y5E2 793 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 SIRT4Q9Y6E7 314 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 SETD1BQ9UPS6 1966 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 FER1L4A9Z1Z3 1794 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 MANSC4A6NHS7 340 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 C3orf70A6NLC5 250 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 EFCAB8A8MWE9 144 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PRRT4C9JH25 899 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 J3KTA2 159 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 SMIM22K7EJ46 135 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PCDH17O14917 1159 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 NPC1O15118 1278 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 CTIFO43310 598 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 LARGE1O95461 756 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 ANXA6P08133 673 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 TACR3P29371 465 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 IL6STP40189 918 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PBX1P40424 430 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PROK1P58294 105 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 WDR5P61964 334 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 HSF1Q00613 529 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 BFSP2Q13515 415 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 CNGA3Q16281 694 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PFKFB3Q16875 520 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 P3H1Q32P28 736 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 TBRG1Q3YBR2 411 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 CC2D1BQ5T0F9 858 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 ACSM6Q6P461 480 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 RFX8Q6ZV50 586 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 TRABD2AQ86V40 505 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 CHSY1Q86X52 802 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 IPO4Q8TEX9 1081 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 RITA1Q96K30 269 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 RMDN3Q96TC7 470 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 FAM118BQ9BPY3 351 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 SENP7Q9BQF6 1050 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 KATNAL1Q9BW62 490 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 TMLHEQ9NVH6 421 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 ASIC5Q9NY37 505 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 SEMA5BQ9P283 1151 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PI4KBQ9UBF8 816 aa3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 HERC5Q9UII4 1024 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-213ENST00000474240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TCRBV5S1A1TA0A578 114 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 CLIC1O00299 241 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 DSCR3O14972 297 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 PIP5K1BO14986 540 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 DHHO43323 396 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 SGPL1O95470 568 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 CSTBP04080 98 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC8A1P32418 973 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 MCM2P49736 904 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TFF2Q03403 129 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TLE3Q04726 772 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 DEUP1Q05D60 604 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 EZH2Q15910 746 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 PFKFB4Q16877 469 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TRIM60Q495X7 471 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 GRHL2Q6ISB3 625 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 RINT1Q6NUQ1 792 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TMEM88Q6PEY1 159 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 RANBP10Q6VN20 620 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 PIK3AP1Q6ZUJ8 805 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 RAB11FIP2Q7L804 512 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 GALNT16Q8N428 558 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF398Q8TD17 642 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 POF1BQ8WVV4 589 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 P2RY11Q96G91 374 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 MACROD1Q9BQ69 325 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 TRIM2Q9C040 744 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 NRIP3Q9NQ35 241 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 VPS45Q9NRW7 570 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 ABHD10Q9NUJ1 306 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 ARL8BQ9NVJ2 186 aa3.77□□□□□ -1.81
ECHDC1-213ENST00000474240 SPATA31A5Q5VU36 1347 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 SPATA31A7Q8IWB4 1347 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 TISP43B9A030 160 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 PPP6CO00743 305 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 CA12O43570 354 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 ASNA1O43681 348 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 LATS1O95835 1130 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 LDHAP00338 332 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms