RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TPSD1Q9BZJ3 242 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 PARD6AQ9NPB6 346 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 CYTH4Q9UIA0 394 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 HCN2Q9UL51 889 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 USP18Q9UMW8 372 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 SLC27A6Q9Y2P4 619 aa23.52■■□□□ 1.36
PTP4A1-203ENST00000473334 PRRT4C9JH25 899 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 MBD3O95983 291 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 NCAM1P13591 858 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 TGM1P22735 817 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 NTSR1P30989 418 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 PTK2Q05397 1052 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 SPEM2Q0P670 501 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 EGFLAMQ63HQ2 1017 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 FAM149B1Q96BN6 582 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 LOXL4Q96JB6 756 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 ZC3H10Q96K80 434 aaKnown RBP23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 STOML2Q9UJZ1 356 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 SPTBN4Q9H254 2564 aa23.51■■□□□ 1.35
PTP4A1-203ENST00000473334 RALGAPA1Q6GYQ0 2036 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 E5RJQ4 531 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 IGLV3-27P01718 113 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 ID4P47928 161 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 ZNF445P59923 1031 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 PDCLQ13371 301 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 USP39Q53GS9 565 aaKnown RBP23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 DPY19L2P1Q6NXN4 242 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 SASS6Q6UVJ0 657 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 TMEM110Q86TL2 294 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 UNC45BQ8IWX7 931 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 DDI1Q8WTU0 396 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 TRIM62Q9BVG3 475 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 PCDHGC3Q9UN70 934 aa23.5■■□□□ 1.35
PTP4A1-203ENST00000473334 FOXN3O00409 490 aaPredicted RBP23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 PAPSS1O43252 624 aaPredicted RBP23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 FYNP06241 537 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 HOXB2P14652 356 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 TBX4P57082 545 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 RING1Q06587 406 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 KCNMA1Q12791 1236 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 PLK5Q496M5 336 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 MPPE1Q53F39 396 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 ADGRF1Q5T601 910 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 NUGGCQ68CJ6 796 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 BEND5Q7L4P6 421 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 DQX1Q8TE96 717 aaKnown RBP23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 SERPINB11Q96P15 392 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 ANO10Q9NW15 660 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 TAB2Q9NYJ8 693 aa23.49■■□□□ 1.35
PTP4A1-203ENST00000473334 TCRBV21S2A2A0A5A6 115 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 DCLK1O15075 740 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 EPN2O95208 641 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 PNMA6AP0CW24 399 aaPredicted RBP23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 CLCN1P35523 988 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 LMNB2Q03252 620 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 NNTQ13423 1086 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 ELF2Q15723 593 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 KLHDC7AQ5VTJ3 777 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 CDKAL1Q5VV42 579 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 SDE2Q6IQ49 451 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 C11orf74Q86VG3 221 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 PASD1Q8IV76 773 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 FAM71AQ8IYT1 594 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 CHPFQ8IZ52 775 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 OLIG1Q8TAK6 271 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 SLC2A11Q9BYW1 496 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 DUSP15Q9H1R2 295 aaPredicted RBP23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 LHX5Q9H2C1 402 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 SEMA4GQ9NTN9 838 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 BCCIPQ9P287 314 aaKnown RBP eCLIP23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 NAALADL1Q9UQQ1 740 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 FHOD1Q9Y613 1164 aa23.48■■□□□ 1.35
PTP4A1-203ENST00000473334 GFRA2O00451 464 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 CAPN9O14815 690 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 TSPAN3O60637 253 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 RHOBTB1O94844 696 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 HOXD9P28356 352 aaPredicted RBP23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 WASP42768 502 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 SLC11A2P49281 568 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 RAPGEF1Q13905 1077 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 DRAP1Q14919 205 aaPredicted RBP23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 CSRP2Q16527 193 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 STX1AQ16623 288 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 GEN1Q17RS7 908 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 CCDC183Q5T5S1 534 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 C11orf57Q6ZUT1 292 aaPredicted RBP23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 ANKS1BQ7Z6G8 1248 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 SLC47A2Q86VL8 602 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 WDTC1Q8N5D0 677 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 HMGB4Q8WW32 186 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 PIWIL1Q96J94 861 aaKnown RBP23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 ACOX2Q99424 681 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 GABRG3Q99928 467 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 LSM14BQ9BX40 385 aaKnown RBP23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 POPDC2Q9HBU9 364 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 INVSQ9Y283 1065 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 TLR6Q9Y2C9 796 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 PLXND1Q9Y4D7 1925 aa23.47■■□□□ 1.35
PTP4A1-203ENST00000473334 GBP1P32455 592 aa23.46■■□□□ 1.35
PTP4A1-203ENST00000473334 KRT9P35527 623 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms