RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 CDC37Q16543 378 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 CCDC96Q2M329 555 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 LETM2Q2VYF4 491 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 TMEM119Q4V9L6 283 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 HSP90AA4PQ58FG1 418 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 MTX3Q5HYI7 312 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 HYIQ5T013 277 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 GPATCH4Q5T3I0 446 aaKnown RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 ZNF626Q68DY1 528 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 PPP4R3AQ6IN85 833 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ARMCX5Q6P1M9 558 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 B3GNT9Q6UX72 402 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 NEK8Q86SG6 692 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 TMEM139Q8IV31 216 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 PASD1Q8IV76 773 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 RHOT2Q8IXI1 618 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 AMOTL1Q8IY63 956 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 SAMD14Q8IZD0 417 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 SPICE1Q8N0Z3 855 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 FAM177A1Q8N128 213 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 PPM1KQ8N3J5 372 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 CDYL2Q8N8U2 506 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 KIAA0895Q8NCT3 520 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 REPS2Q8NFH8 660 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 CCDC148Q8NFR7 591 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 KIAA1524Q8TCG1 905 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ACTRT2Q8TDY3 377 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 NINJ1Q92982 152 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 HPS3Q969F9 1004 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 FERMT2Q96AC1 680 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 NACC2Q96BF6 587 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 DNAJC19Q96DA6 116 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 CLUHP3Q96NS8 147 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ELF4Q99607 663 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 C7orf25Q9BPX7 421 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ORAI3Q9BRQ5 295 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ANO3Q9BYT9 981 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 TRIM5Q9C035 493 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 TMX4Q9H1E5 349 aaPredicted RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 DEFB129Q9H1M3 183 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 RANBP17Q9H2T7 1088 aaKnown RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 TMX1Q9H3N1 280 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 VEZTQ9HBM0 779 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 ZNF287Q9HBT7 754 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 C6orf50Q9HD87 102 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 KCNMB3Q9NPA1 279 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 SPTLC3Q9NUV7 552 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 IFNKQ9P0W0 207 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 HERC5Q9UII4 1024 aaKnown RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 CNOT7Q9UIV1 285 aaKnown RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 HACL1Q9UJ83 578 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 PCDHA1Q9Y5I3 950 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 SMCHD1A6NHR9 2005 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 PSME4Q14997 1843 aa2.67□□□□□ -1.98
VPS45-206ENST00000472756 BRCA1P38398 1863 aaKnown RBP2.67□□□□□ -1.98
VPS45-206ENST00000472756 A0A0U1RQJ8 604 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 TRIM49BA6NDI0 452 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 E9PMD0 336 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 hCG_1984214I3L0E3 225 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 MSH4O15457 936 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 NRP2O60462 931 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 MED24O75448 989 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 OFD1O75665 1012 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 DDNO94850 711 aaPredicted RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 CAVIN2O95810 425 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 RPN1P04843 607 aaKnown RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 CYP3A4P08684 503 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 CLEC2LP0C7M8 214 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 ARP10275 920 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 POU3F2P20265 443 aaPredicted RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 CD40P25942 277 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 GNA11P29992 359 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 HOXD13P35453 343 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 SREBF1P36956 1147 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 SLC12A3P55017 1021 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 NRG3P56975 720 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 UBXN2AP68543 259 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 APBA1Q02410 837 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 GHRHRQ02643 423 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 STK4Q13043 487 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 ORC2Q13416 577 aaPredicted RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 KCNB1Q14721 858 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 CALCRLQ16602 461 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 SRSF7Q16629 238 aaKnown RBP eCLIP2.66□□□□□ -1.98
VPS45-206ENST00000472756 USH1GQ495M9 461 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 Q4G0T1 1027 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 MUM1L1Q5H9M0 696 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 ZNF658Q5TYW1 1059 aaPredicted RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 RRAGBQ5VZM2 374 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 CDCA2Q69YH5 1023 aaPredicted RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 ESRP1Q6NXG1 681 aaKnown RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 EFCAB12Q6NXP0 572 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 TTI2Q6NXR4 508 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 CCDC174Q6PII3 467 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 NOP9Q86U38 636 aaKnown RBP2.66□□□□□ -1.98
VPS45-206ENST00000472756 LRRTM3Q86VH5 581 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 CATSPER3Q86XQ3 398 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 VSTM4Q8IW00 320 aa2.66□□□□□ -1.98
VPS45-206ENST00000472756 LRRC8AQ8IWT6 810 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms