RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 FGFR1OPO95684 399 aaKnown RBP9.43□□□□□ -0.9
USF1-204ENST00000472217 CAVIN2O95810 425 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 LIMK1P53667 647 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 MFAP3P55082 362 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 TRIP4Q15650 581 aaPredicted RBP9.43□□□□□ -0.9
USF1-204ENST00000472217 MAP7D1Q3KQU3 841 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 KIAA1211LQ6NV74 962 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 FAM217AQ8IXS0 508 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 CLEC4CQ8WTT0 213 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 SPACA7Q96KW9 195 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 GABRG3Q99928 467 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 CD248Q9HCU0 757 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 CACNA2D2Q9NY47 1150 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 SFMBT1Q9UHJ3 866 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 MBD1Q9UIS9 605 aaPredicted RBP9.43□□□□□ -0.9
USF1-204ENST00000472217 CNTN6Q9UQ52 1028 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 SLC27A6Q9Y2P4 619 aa9.43□□□□□ -0.9
USF1-204ENST00000472217 HBS1LQ9Y450 684 aaKnown RBP9.43□□□□□ -0.9
USF1-204ENST00000472217 WASH3PC4AMC7 463 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 MAP3K13O43283 966 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 TSPAN3O60637 253 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 LTFP02788 710 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 CYBBP04839 570 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 KRT5P13647 590 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 NDUFV2P19404 249 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 DHPSP49366 369 aaPredicted RBP9.42□□□□□ -0.9
USF1-204ENST00000472217 HARS2P49590 506 aaKnown RBP9.42□□□□□ -0.9
USF1-204ENST00000472217 APBA1Q02410 837 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 GEN1Q17RS7 908 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 GJB7Q6PEY0 223 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 TRIM65Q6PJ69 517 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 IRF2BP1Q8IU81 584 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 IPO4Q8TEX9 1081 aaKnown RBP9.42□□□□□ -0.9
USF1-204ENST00000472217 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 IRGQQ8WZA9 623 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 PIWIL1Q96J94 861 aaKnown RBP9.42□□□□□ -0.9
USF1-204ENST00000472217 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 MIS12Q9H081 205 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 CLSTN2Q9H4D0 955 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
USF1-204ENST00000472217 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 CLEC4EQ9ULY5 219 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 RAD54BQ9Y620 910 aa9.42□□□□□ -0.9
USF1-204ENST00000472217 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 LNP1A1A4G5 178 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 PATE3B3GLJ2 98 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 GFRA2O00451 464 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 FBXO21O94952 628 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 LETM1O95202 739 aaPredicted RBP9.41□□□□□ -0.9
USF1-204ENST00000472217 LATS1O95835 1130 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 IGLV3-27P01718 113 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 SLC9A1P19634 815 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
USF1-204ENST00000472217 PTGER3P43115 390 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 GPD2P43304 727 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 RPL34P49207 117 aaKnown RBP9.41□□□□□ -0.9
USF1-204ENST00000472217 BYSLQ13895 437 aaKnown RBP9.41□□□□□ -0.9
USF1-204ENST00000472217 MPPE1Q53F39 396 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 PPM1JQ5JR12 505 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 STPG1Q5TH74 334 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 IL31Q6EBC2 164 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 DENND1BQ6P3S1 775 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 LPCAT2Q7L5N7 544 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 ANKS1BQ7Z6G8 1248 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 CREBRFQ8IUR6 639 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 TMEFF1Q8IYR6 380 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 HSFY1Q96LI6 401 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 EDEM2Q9BV94 578 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 SLC2A11Q9BYW1 496 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 SLC6A17Q9H1V8 727 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 ACP6Q9NPH0 428 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 STOML2Q9UJZ1 356 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 STON1Q9Y6Q2 735 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 MUC22E2RYF6 1773 aaPredicted RBP9.41□□□□□ -0.9
USF1-204ENST00000472217 NUP205Q92621 2012 aa9.41□□□□□ -0.9
USF1-204ENST00000472217 ATXN2Q99700 1313 aaKnown RBP9.4□□□□□ -0.9
USF1-204ENST00000472217 IGHV1OR15-9A0A0B4J2B8 117 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 BECN2A8MW95 431 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 TM4SF5O14894 197 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 ZBTB24O43167 697 aaPredicted RBP9.4□□□□□ -0.9
USF1-204ENST00000472217 THAP12O43422 761 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 MED7O43513 233 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 FYNP06241 537 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 HLA-FP30511 346 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 GNA15P30679 374 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 IL12RB1P42701 662 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 SGSHP51688 502 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 RPL6Q02878 288 aaKnown RBP9.4□□□□□ -0.9
USF1-204ENST00000472217 RING1Q06587 406 aa9.4□□□□□ -0.9
USF1-204ENST00000472217 ENPP2Q13822 863 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms