RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 APODP05090 189 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 TRIP4Q15650 581 aaPredicted RBP15.73■□□□□ 0.11
CALD1-215ENST00000472096 TPGS1Q6ZTW0 290 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 ASCL5Q7RTU5 278 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 APTXQ7Z2E3 356 aaKnown RBP15.73■□□□□ 0.11
CALD1-215ENST00000472096 TMEM110Q86TL2 294 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 DENND1CQ8IV53 801 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 SFTPA1Q8IWL2 248 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 NAT16Q8N8M0 369 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 C1orf131Q8NDD1 294 aaKnown RBP15.73■□□□□ 0.11
CALD1-215ENST00000472096 CCDC26Q8TAB7 109 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 GOLGA1Q92805 767 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 ACDQ96AP0 544 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 FUCA2Q9BTY2 467 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 BBS2Q9BXC9 721 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 LHX5Q9H2C1 402 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 ARHGEF4Q9NR80 690 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 TJP2Q9UDY2 1190 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 AGO1Q9UL18 857 aaKnown RBP15.73■□□□□ 0.11
CALD1-215ENST00000472096 SIK3Q9Y2K2 1263 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 USP34Q70CQ2 3546 aa15.73■□□□□ 0.11
CALD1-215ENST00000472096 FAM186AA6NE01 2351 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 EPHB6O15197 1021 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 FYNP06241 537 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 TYRP14679 529 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 NRLP54845 237 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 SEC13P55735 322 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 BPIFB4P59827 614 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 DMWDQ09019 674 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 DHX40Q8IX18 779 aaKnown RBP15.72■□□□□ 0.11
CALD1-215ENST00000472096 SCUBE3Q8IX30 993 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 CPXM2Q8N436 756 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 WDTC1Q8N5D0 677 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 USP33Q8TEY7 942 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 FAM149B1Q96BN6 582 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 P2RY11Q96G91 374 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 PIWIL1Q96J94 861 aaKnown RBP15.72■□□□□ 0.11
CALD1-215ENST00000472096 CPXM1Q96SM3 734 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 STK33Q9BYT3 514 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 SEMA4AQ9H3S1 761 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 FAM207AQ9NSI2 230 aaPredicted RBP15.72■□□□□ 0.11
CALD1-215ENST00000472096 WDR35Q9P2L0 1181 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
CALD1-215ENST00000472096 ANTXRLA6NF34 631 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 IGLV3-27P01718 113 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 NCAM1P13591 858 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 ATP1A3P13637 1013 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 CYP11B1P15538 503 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 CDK11BP21127 795 aaKnown RBP15.71■□□□□ 0.11
CALD1-215ENST00000472096 HOXC13P31276 330 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 KRT9P35527 623 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 CHKAP35790 457 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 GRIA2P42262 883 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 SYCP1Q15431 976 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 GRAMD4Q6IC98 578 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 BEND5Q7L4P6 421 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 FAM217AQ8IXS0 508 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 TERB1Q8NA31 727 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 DQX1Q8TE96 717 aaKnown RBP15.71■□□□□ 0.11
CALD1-215ENST00000472096 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 BHMTQ93088 406 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 NOX5Q96PH1 765 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.11
CALD1-215ENST00000472096 TRIM62Q9BVG3 475 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 DNAJC17Q9NVM6 304 aaKnown RBP15.71■□□□□ 0.11
CALD1-215ENST00000472096 POLR3BQ9NW08 1133 aaPredicted RBP15.71■□□□□ 0.11
CALD1-215ENST00000472096 DAAM1Q9Y4D1 1078 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 CEP83Q9Y592 693 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 DMDP11532 3685 aa15.71■□□□□ 0.11
CALD1-215ENST00000472096 OTOGLQ3ZCN5 2332 aa15.71■□□□□ 0.1
CALD1-215ENST00000472096 PLXND1Q9Y4D7 1925 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 A0A0A0MRY4 1105 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 SYCE3A1L190 88 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 LRRC10BA6NIK2 292 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 TRIM24O15164 1050 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 LATS1O95835 1130 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 PENKP01210 267 aaPredicted RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 PTMSP20962 102 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 HOXA6P31267 233 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 CDH5P33151 784 aaPredicted RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 FNTBP49356 437 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 JAM2P57087 298 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 POLR2FP61218 127 aaKnown RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 MRPS21P82921 87 aaKnown RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 DMC1Q14565 340 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 PREPLQ4J6C6 727 aaPredicted RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 PTPN20Q4JDL3 420 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 FYB2Q5VWT5 728 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 SYT13Q7L8C5 426 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 EPS8L1Q8TE68 723 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 PPP1R13BQ96KQ4 1090 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 ERGIC2Q96RQ1 377 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 PLK2Q9NYY3 685 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 SLC8A2Q9UPR5 921 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 NAALADL1Q9UQQ1 740 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 RIF1Q5UIP0 2472 aaKnown RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 RALGAPA1Q6GYQ0 2036 aa15.7■□□□□ 0.1
CALD1-215ENST00000472096 MUC22E2RYF6 1773 aaPredicted RBP15.7■□□□□ 0.1
CALD1-215ENST00000472096 ZFHX2Q9C0A1 2572 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms