RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 IL31Q6EBC2 164 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 PM20D1Q6GTS8 502 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 KLHL10Q6JEL2 608 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 TTI2Q6NXR4 508 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 RFWD3Q6PCD5 774 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 GJB7Q6PEY0 223 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 CYP2U1Q7Z449 544 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 CACUL1Q86Y37 369 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 FMNL3Q8IVF7 1028 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 KIAA1958Q8N8K9 716 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 IPO4Q8TEX9 1081 aaKnown RBP8.47□□□□□ -1.05
USP48-207ENST00000471752 KREMEN1Q96MU8 473 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 MKRN2Q9H000 416 aaKnown RBP8.47□□□□□ -1.05
USP48-207ENST00000471752 MARCH2Q9P0N8 246 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 CYTH4Q9UIA0 394 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 PILRBQ9UKJ0 227 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 WASF3Q9UPY6 502 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 THADAQ6YHU6 1953 aa8.47□□□□□ -1.05
USP48-207ENST00000471752 SNPHO15079 494 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 PRKCHP24723 683 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
USP48-207ENST00000471752 FMO5P49326 533 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 BNC1Q01954 994 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 ADIGQ0VDE8 80 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 MORC3Q14149 939 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 FUT11Q495W5 492 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 COBLL1Q53SF7 1204 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 TRIM61Q5EBN2 209 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 EOGTQ5NDL2 527 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 BSPRYQ5W0U4 402 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 KLHDC10Q6PID8 442 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 TMEM270Q6UE05 265 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 CHPFQ8IZ52 775 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 DEFB124Q8NES8 71 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 CYB5D2Q8WUJ1 264 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 SPOCK2Q92563 424 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 SMARCE1Q969G3 411 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 CCDC47Q96A33 483 aaKnown RBP8.46□□□□□ -1.06
USP48-207ENST00000471752 MRGPRX1Q96LB2 322 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 CAMK1GQ96NX5 476 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 GSDMAQ96QA5 445 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 GABRG3Q99928 467 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 UBXN6Q9BZV1 441 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 IMPG2Q9BZV3 1241 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 PNPLA8Q9NP80 782 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
USP48-207ENST00000471752 CLIC5Q9NZA1 410 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 WDR35Q9P2L0 1181 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 THAP10Q9P2Z0 257 aaPredicted RBP8.46□□□□□ -1.06
USP48-207ENST00000471752 TJP2Q9UDY2 1190 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 ARMCX3Q9UH62 379 aaPredicted RBP8.46□□□□□ -1.06
USP48-207ENST00000471752 STON1Q9Y6Q2 735 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 BPTFQ12830 3046 aa8.46□□□□□ -1.06
USP48-207ENST00000471752 SPAARA0A1B0GVQ0 90 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 KHNYNO15037 678 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 SLC16A3O15427 465 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 ALDH1A2O94788 518 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 C1QTNF9P0C862 333 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 ENGP17813 658 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 SLC6A4P31645 630 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 NOVA1P51513 510 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 DAOAP59103 153 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 PITX1P78337 314 aaPredicted RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 FKBP3Q00688 224 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 RPL6Q02878 288 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 ZNF33AQ06730 810 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 ENPEPQ07075 957 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 TAF5Q15542 800 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 SGO2Q562F6 1265 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 NADSYN1Q6IA69 706 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 DENND1BQ6P3S1 775 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 MMS22LQ6ZRQ5 1243 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 LPCAT2Q7L5N7 544 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 IRF2BP1Q8IU81 584 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 ZNF276Q8N554 614 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 TRIML1Q8N9V2 468 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 ADAM32Q8TC27 787 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 SLC35F5Q8WV83 523 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 NELFBQ8WX92 580 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 XPO6Q96QU8 1125 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 XPO7Q9UIA9 1087 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 LSM7Q9UK45 103 aaKnown RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 AJAP1Q9UKB5 411 aaPredicted RBP8.45□□□□□ -1.06
USP48-207ENST00000471752 CTNND2Q9UQB3 1225 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 PCDHB4Q9Y5E5 795 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 PCNX2A6NKB5 2137 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 NUMA1Q14980 2115 aa8.45□□□□□ -1.06
USP48-207ENST00000471752 XPO1O14980 1071 aaKnown RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 CFIP05156 583 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 RALAP11233 206 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 VDRP11473 427 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 HOXD9P28356 352 aaPredicted RBP8.44□□□□□ -1.06
USP48-207ENST00000471752 HLA-FP30511 346 aa8.44□□□□□ -1.06
USP48-207ENST00000471752 CD70P32970 193 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms