RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ELF4Q99607 663 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 NRSN2Q9GZP1 204 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 GZF1Q9H116 711 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 SMYD3Q9H7B4 428 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 BLOC1S4Q9NUP1 217 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 FAM49BQ9NUQ9 324 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 ELOVL2Q9NXB9 296 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 THAP10Q9P2Z0 257 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 NAGPAQ9UK23 515 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 PLA2G4CQ9UP65 541 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 NCKAP1Q9Y2A7 1128 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 NME7Q9Y5B8 376 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 PCDHB13Q9Y5F0 798 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 HECTD1Q9ULT8 2610 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 A0A1B0GTQ1 180 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 A0A1W2PQH9 124 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 DFNA5O60443 496 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 SDC3O75056 442 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 ACO1P21399 889 aaKnown RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 CD27P26842 260 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 CORO1AP31146 461 aaKnown RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 ARRB1P49407 418 aaPredicted RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 ACADVLP49748 655 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 TUBP50607 506 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 CYP2J2P51589 502 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 MYL6P60660 151 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 GABREP78334 506 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 POU5F1Q01860 360 aaKnown RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 GRIN1Q05586 938 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 EFEMP1Q12805 493 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 BNIP3Q12983 259 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 BIRC3Q13489 604 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 SURF1Q15526 300 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 TTC31Q49AM3 519 aaPredicted RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 HS1BP3Q53T59 392 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 SV2BQ7L1I2 683 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 RSRC2Q7L4I2 434 aaKnown RBP7.23□□□□□ -1.25
HDAC1-204ENST00000471488 ERICH1Q86X53 443 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 DENND1CQ8IV53 801 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 SLC2A14Q8TDB8 520 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 KCNE4Q8WWG9 221 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 SMARCD1Q96GM5 515 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 FGFBP2Q9BYJ0 223 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 PANK2Q9BZ23 570 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 OSBPL2Q9H1P3 480 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 FBXO44Q9H4M3 255 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 GDF3Q9NR23 364 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 MARK1Q9P0L2 795 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 PCDHB1Q9Y5F3 818 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 PCDHGA1Q9Y5H4 931 aa7.23□□□□□ -1.25
HDAC1-204ENST00000471488 NPC1O15118 1278 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 TACC1O75410 805 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 RNASEH2AO75792 299 aaKnown RBP7.22□□□□□ -1.25
HDAC1-204ENST00000471488 BEST1O76090 585 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 C1SP09871 688 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 GAP43P17677 238 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 CHKAP35790 457 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 PLA2G4AP47712 749 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF132P52740 706 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 UCNP55089 124 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 RACK1P63244 317 aaKnown RBP7.22□□□□□ -1.25
HDAC1-204ENST00000471488 NFKB2Q00653 900 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 RTP5Q14D33 572 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 E2F5Q15329 346 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF699Q32M78 642 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ZSCAN23Q3MJ62 389 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ARL6IP4Q66PJ3 421 aaKnown RBP7.22□□□□□ -1.25
HDAC1-204ENST00000471488 KIAA0895LQ68EN5 471 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 FBXL19Q6PCT2 694 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 GPRIN1Q7Z2K8 1008 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 TMC6Q7Z403 805 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 WDR49Q8IV35 697 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 DHX40Q8IX18 779 aaKnown RBP7.22□□□□□ -1.25
HDAC1-204ENST00000471488 C1orf216Q8TAB5 229 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 SERAC1Q96JX3 654 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 TNIP3Q96KP6 325 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 SMOQ99835 787 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 OMDQ99983 421 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ARHGAP9Q9BRR9 750 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 PCED1AQ9H1Q7 454 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 ST6GALNAC4Q9H4F1 302 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 NMUR1Q9HB89 426 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 PANK4Q9NVE7 773 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 OSER1Q9NX31 292 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 HSPBP1Q9NZL4 362 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 SEL1LQ9UBV2 794 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 CCDC39Q9UFE4 941 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 CLEC4EQ9ULY5 219 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 KIF3AQ9Y496 699 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 MYO18BQ8IUG5 2567 aa7.22□□□□□ -1.25
HDAC1-204ENST00000471488 CFAP46Q8IYW2 2715 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 A0A1W2PP55 124 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SLC12A8A0AV02 714 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 VILLO15195 856 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CLIC2O15247 247 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 FFAR2O15552 330 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 GREM1O60565 184 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 USP12O75317 370 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 STC2O76061 302 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 MT-CO3P00414 261 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms