RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 CCR1P32246 355 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TERF1P54274 439 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 EPHA5P54756 1037 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CDH6P55285 790 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 RING1Q06587 406 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 EFEMP1Q12805 493 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 MTA1Q13330 715 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 KLF1Q13351 362 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 DPYSL3Q14195 570 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 KRT81Q14533 505 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 SIX1Q15475 284 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TRIP4Q15650 581 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CYP1B1Q16678 543 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CA9Q16790 459 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 DUSP6Q16828 381 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 BBS12Q6ZW61 710 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 ANKS1BQ7Z6G8 1248 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TMEM150AQ86TG1 271 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TMC8Q8IU68 726 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 MMGT1Q8N4V1 131 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 LEMD2Q8NC56 503 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 LRRN4CLQ8ND94 238 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 ACSF2Q96CM8 615 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 MRPL38Q96DV4 380 aaKnown RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 FCRL2Q96LA5 508 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 HAPLN3Q96S86 360 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 KCTD15Q96SI1 283 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 OSBPL2Q9H1P3 480 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 WDCPQ9H6R7 721 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TLE6Q9H808 572 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 CERS4Q9HA82 394 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 ZNF334Q9HCZ1 680 aaPredicted RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 RBM12Q9NTZ6 932 aaKnown RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 GPATCH2LQ9NWQ4 482 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 COX16Q9P0S2 106 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 DNMT3LQ9UJW3 386 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 HBS1LQ9Y450 684 aaKnown RBP9.04□□□□□ -0.96
HDLBP-233ENST00000470710 PLXNA4Q9HCM2 1894 aa9.04□□□□□ -0.96
HDLBP-233ENST00000470710 TCRBV7S2A1N4TA0A589 114 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 I6L893 689 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 CCL16O15467 120 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 MSI1O43347 362 aaKnown RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 XYLBO75191 536 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 TBX18O95935 607 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 IGLV3-27P01718 113 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 CD48P09326 243 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 IL4RP24394 825 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HTR7P34969 479 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 GTF2F1P35269 517 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ATP5C1P36542 298 aaKnown RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HCAR3P49019 387 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 TBX4P57082 545 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 SEMA3BQ13214 749 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 TFDP2Q14188 446 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ACBD5Q5T8D3 534 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ADGRD2Q7Z7M1 963 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ZDHHC14Q8IZN3 488 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 PRELID2Q8N945 189 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 RNF34Q969K3 372 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 PPP2R3CQ969Q6 453 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 RUNDC3BQ96NL0 473 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HERPUD2Q9BSE4 406 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HEMGNQ9BXL5 484 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 CALN1Q9BXU9 219 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 FRMD8P1Q9BZ68 369 aaPredicted RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 TKTL2Q9H0I9 626 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 DHX35Q9H5Z1 703 aaKnown RBP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ANLNQ9NQW6 1124 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 ASAH2Q9NR71 780 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HOMER3Q9NSC5 361 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.03□□□□□ -0.96
HDLBP-233ENST00000470710 RASAL2Q9UJF2 1139 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 NUDT5Q9UKK9 219 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 HCFC2Q9Y5Z7 792 aa9.03□□□□□ -0.96
HDLBP-233ENST00000470710 LAMA3Q16787 3333 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 TMEM265A0A087WTH1 108 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 SLC12A8A0AV02 714 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 SOBPA7XYQ1 873 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 H3BRJ5 948 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 PER2O15055 1255 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 COCHO43405 550 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 PHF2O75151 1096 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 OLFM2O95897 454 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 APOEP02649 317 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 KRT10P13645 584 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 ZFXP17010 805 aaPredicted RBP9.02□□□□□ -0.97
HDLBP-233ENST00000470710 DDX6P26196 483 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDLBP-233ENST00000470710 GABRR2P28476 465 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 ARL4AP40617 200 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 NRIP1P48552 1158 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 FNTAP49354 379 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 COG7P83436 770 aa9.02□□□□□ -0.97
HDLBP-233ENST00000470710 C2orf54Q08AI8 447 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms