RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 CLCA2Q9UQC9 943 aa8.68□□□□□ -1.02
LSM2-210ENST00000470086 DERAQ9Y315 318 aa8.68□□□□□ -1.02
LSM2-210ENST00000470086 SNX9Q9Y5X1 595 aa8.68□□□□□ -1.02
LSM2-210ENST00000470086 LRP4O75096 1905 aa8.68□□□□□ -1.02
LSM2-210ENST00000470086 ZFHX3Q15911 3703 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 TSPAN3O60637 253 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 FSBPO95073 299 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 ACO1P21399 889 aaKnown RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 DGKGP49619 791 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 TOB1P50616 345 aaPredicted RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 MFAP3P55082 362 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 SPTBN1Q01082 2364 aaKnown RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 NOTCH2Q04721 2471 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 KCNA1Q09470 495 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 BTBD8Q5XKL5 378 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 KIAA1958Q8N8K9 716 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 SCFD1Q8WVM8 642 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 KCNN1Q92952 543 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 SAAL1Q96ER3 474 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 ELF4Q99607 663 aaPredicted RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 KIF2CQ99661 725 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 MRPL45Q9BRJ2 306 aaKnown RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 FGFBP2Q9BYJ0 223 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 MTG2Q9H4K7 406 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 THAP10Q9P2Z0 257 aaPredicted RBP8.67□□□□□ -1.02
LSM2-210ENST00000470086 PAXBP1Q9Y5B6 917 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 ABCA12Q86UK0 2595 aa8.67□□□□□ -1.02
LSM2-210ENST00000470086 A0A1W2PR77 199 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 SUV39H1O43463 412 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 SDC3O75056 442 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 PFKLP17858 780 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 MYL7Q01449 175 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 TLE1Q04724 770 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 KCNJ12Q14500 433 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
LSM2-210ENST00000470086 ME3Q16798 604 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 TTC38Q5R3I4 469 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 FYB2Q5VWT5 728 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 Q6ZNB5 142 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 GPRIN1Q7Z2K8 1008 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 ELMO3Q96BJ8 720 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 PRR11Q96HE9 360 aaPredicted RBP8.66□□□□□ -1.02
LSM2-210ENST00000470086 KCNK16Q96T55 309 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 ASB7Q9H672 318 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 C17orf75Q9HAS0 396 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 OSGEPQ9NPF4 335 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 STARD5Q9NSY2 213 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 GDAP2Q9NXN4 497 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 TBC1D14Q9P2M4 693 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 MAGEC2Q9UBF1 373 aaPredicted RBP8.66□□□□□ -1.02
LSM2-210ENST00000470086 CHORDC1Q9UHD1 332 aaPredicted RBP8.66□□□□□ -1.02
LSM2-210ENST00000470086 FBXO10Q9UK96 956 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 NUDT5Q9UKK9 219 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 MAN2B2Q9Y2E5 1009 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
LSM2-210ENST00000470086 SH3BP1Q9Y3L3 701 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 PCDHB6Q9Y5E3 794 aa8.66□□□□□ -1.02
LSM2-210ENST00000470086 SDK2Q58EX2 2172 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 LY6G6EA0A0G2JKS1 128 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 GFRA2O00451 464 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 TRIM38O00635 465 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 HUS1O60921 280 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 CDKL5O76039 1030 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 SEMA4FO95754 770 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 MT-CO3P00414 261 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 PDGFRBP09619 1106 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 ZDHHC11BP0C7U3 371 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 FAM87AP0C7U9 286 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 RNF224P0DH78 156 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 XBP1P17861 261 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 POU3F2P20265 443 aaPredicted RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 RPIAP49247 311 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 PDE6CP51160 858 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 SLC5A3P53794 718 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 TFAMQ00059 246 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 CLN3Q13286 438 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 ZRSR1Q15695 479 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 CDCP2Q5VXM1 449 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 CPLX2Q6PUV4 134 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 VSTM1Q6UX27 236 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 ZNF574Q6ZN55 896 aaPredicted RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 PAQR9Q6ZVX9 377 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 DDX42Q86XP3 938 aaKnown RBP eCLIP8.65□□□□□ -1.02
LSM2-210ENST00000470086 SPATS2Q86XZ4 545 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 CD302Q8IX05 232 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 SYT2Q8N9I0 419 aaPredicted RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 ZMIZ2Q8NF64 920 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 OR5B17Q8NGF7 314 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 PRCCQ92733 491 aaPredicted RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 EXTL1Q92935 676 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 GTF3C6Q969F1 213 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 FBXO32Q969P5 355 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
LSM2-210ENST00000470086 PIWIL1Q96J94 861 aaKnown RBP8.65□□□□□ -1.02
LSM2-210ENST00000470086 C8orf48Q96LL4 319 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms