RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 BACE1P56817 501 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 NIPAL4Q0D2K0 466 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 LAMTOR4Q0VGL1 99 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 TRIM42Q8IWZ5 723 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 GSDMBQ8TAX9 411 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 CNPY3Q9BT09 278 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 CPSF2Q9P2I0 782 aaKnown RBP10.63□□□□□ -0.71
SMC4-210ENST00000469762 PROCP04070 461 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 PABPC4LP0CB38 370 aaKnown RBP10.63□□□□□ -0.71
SMC4-210ENST00000469762 ALOX15P16050 662 aaPredicted RBP10.63□□□□□ -0.71
SMC4-210ENST00000469762 ITGAXP20702 1163 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 GPD1P21695 349 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 CRADDP78560 199 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 GBE1Q04446 702 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 LSAMPQ13449 338 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 TBCCQ15814 346 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 PABPC1LQ4VXU2 614 aaKnown RBP10.63□□□□□ -0.71
SMC4-210ENST00000469762 UGT2A3Q6UWM9 527 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 FRMD7Q6ZUT3 714 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 HPS6Q86YV9 775 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 ACTRT2Q8TDY3 377 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 ADPGKQ9BRR6 497 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 ASNSD1Q9NWL6 643 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 BTBD7Q9P203 1132 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 CDH22Q9UJ99 828 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 POMPQ9Y244 141 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 MFHAS1Q9Y4C4 1052 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 PCDHA11Q9Y5I1 949 aa10.63□□□□□ -0.71
SMC4-210ENST00000469762 SF3B1O75533 1304 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■■■■■ 165.2
SMC4-210ENST00000469762 M0QYV0 167 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 ZBTB14O43829 449 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 CIB2O75838 187 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 ALDH1A2O94788 518 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 PDGFRAP16234 1089 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 CXCL9Q07325 125 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 HIC1Q14526 733 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 FAM47CQ5HY64 1035 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 MARK2Q7KZI7 788 aaKnown RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 TMEM176AQ96HP8 235 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 MYOZ2Q9NPC6 264 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 MED7O43513 233 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 PLIN3O60664 434 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 ZMPSTE24O75844 475 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 PRKCBP05771 671 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 UQCRBP14927 111 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 VCLP18206 1134 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 TCF7P36402 384 aaPredicted RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 SLC1A6P48664 564 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 TSHZ1Q6ZSZ6 1077 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 RSPH3Q86UC2 560 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 RNF149Q8NC42 400 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 NME7Q9Y5B8 376 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 CASQ2O14958 399 aaPredicted RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 KRT38O76015 456 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 ATXN1P54253 815 aaKnown RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 ASPHQ12797 758 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 PPM1JQ5JR12 505 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 N4BP2L1Q5TBK1 243 aaPredicted RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 STEAP4Q687X5 459 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 KBTBD6Q86V97 674 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 SATL1Q86VE3 508 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 C10orf107Q8IVU9 208 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 AGBL3Q8NEM8 1001 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 APBB2Q92870 758 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 LRRC39Q96DD0 335 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 CCDC28BQ9BUN5 200 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 GBA2Q9HCG7 927 aaPredicted RBP10.62□□□□□ -0.71
SMC4-210ENST00000469762 ZNF358Q9NW07 568 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 SORCS3Q9UPU3 1222 aa10.62□□□□□ -0.71
SMC4-210ENST00000469762 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 GPR25O00155 361 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 TPP1O14773 563 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 ATP5BP06576 529 aaKnown RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 OAZ1P54368 228 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 TFDP2Q14188 446 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 ZRSR2Q15696 482 aaKnown RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 TBC1D25Q3MII6 688 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 RASSF3Q86WH2 238 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 TRIM50Q86XT4 487 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 C12orf29Q8N999 325 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 PIH1D1Q9NWS0 290 aaKnown RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 CTDP1Q9Y5B0 961 aaPredicted RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 EVPLQ92817 2033 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 STK10O94804 968 aaKnown RBP10.61□□□□□ -0.71
SMC4-210ENST00000469762 KRT19P08727 400 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 TGM2P21980 687 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 EPHB1P54762 984 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 HMGCS2P54868 508 aa10.61□□□□□ -0.71
SMC4-210ENST00000469762 HDAC4P56524 1084 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms