RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TOP3BO95985 862 aaKnown RBP15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CD4P01730 458 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SLC8A1P32418 973 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SERPINB4P48594 390 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SULT1E1P49888 294 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SNX16P57768 344 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 LILRA4P59901 499 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 BEX3Q00994 111 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CBLBQ13191 982 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SMAD1Q15797 465 aaKnown RBP15.18■□□□□ 0.02
CBWD3-205ENST00000469687 FAM110CQ1W6H9 321 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 TP53INP2Q8IXH6 220 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SMG8Q8ND04 991 aaKnown RBP15.18■□□□□ 0.02
CBWD3-205ENST00000469687 MCUQ8NE86 351 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 LRMDAQ9H2I8 198 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 IPPQ9Y573 584 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SCN4AP35499 1836 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 COPEO14579 308 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 RFPL1O75677 317 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 PRKD1Q15139 912 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CTC1Q2NKJ3 1217 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 DCAF6Q58WW2 860 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CES4AQ5XG92 561 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 ZFP42Q96MM3 310 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF560Q96MR9 790 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 KCNK13Q9HB14 408 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CPA4Q9UI42 421 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 FZD10Q9ULW2 581 aa15.18■□□□□ 0.02
CBWD3-205ENST00000469687 CYB561D2O14569 222 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TROVE2P10155 538 aaKnown RBP eCLIP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 NEFHP12036 1026 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 MATKP42679 507 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 CCL14Q16627 93 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 MROH9Q5TGP6 573 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 KIAA0319Q5VV43 1072 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 SYPL2Q5VXT5 272 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 HFE2Q6ZVN8 426 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 PAQR9Q6ZVX9 377 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 CLNKQ7Z7G1 428 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 PARK7Q99497 189 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 EBNA1BP2Q99848 306 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 FRMD8Q9BZ67 464 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 GTF2IRD1Q9UHL9 959 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TSC2P49815 1807 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 KCNE1P15382 129 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TPSB2P20231 275 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 NR2C2P49116 596 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TPSAB1Q15661 275 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 XKR4Q5GH76 650 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ANKRD20A3Q5VUR7 823 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ARCQ7LC44 396 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 STRADAQ7RTN6 431 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 RNF169Q8NCN4 708 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 GSDMBQ8TAX9 411 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 TFB1MQ8WVM0 346 aaKnown RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 HTR3CQ8WXA8 447 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 UPF1Q92900 1129 aaKnown RBP eCLIP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 OXNAD1Q96HP4 312 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 NCAPGQ9BPX3 1015 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF395Q9H8N7 513 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 FBXO6Q9NRD1 293 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF180Q9UJW8 692 aa15.17■□□□□ 0.02
CBWD3-205ENST00000469687 NUP205Q92621 2012 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 PTGESO14684 152 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 HUS1O60921 280 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 DGKIO75912 1065 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 KRT37O76014 449 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 MYL3P08590 195 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 ZNF865P0CJ78 1059 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-205ENST00000469687 ZFXP17010 805 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-205ENST00000469687 EPHB2P29323 1055 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 SCNN1AP37088 669 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 ACADSBP45954 432 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 PSEN2P49810 448 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 AFF1P51825 1210 aaKnown RBP15.16■□□□□ 0.02
CBWD3-205ENST00000469687 CDC42EP1Q00587 391 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 SEMA5AQ13591 1074 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 NBPF20Q3BBV1 942 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 SLC25A52Q3SY17 297 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 SV2CQ496J9 727 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 WSCD1Q658N2 575 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
CBWD3-205ENST00000469687 ARMC2Q8NEN0 867 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 PGLYRP2Q96PD5 576 aa15.16■□□□□ 0.02
CBWD3-205ENST00000469687 TBC1D10AQ9BXI6 508 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms