RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CAPNS1P04632 268 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 NCAM1P13591 858 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 KRT13P13646 458 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 HLA-EP13747 358 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 PRKCHP24723 683 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
HDAC3-204ENST00000469207 SYKP43405 635 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 PSEN1P49768 467 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 TKTL1P51854 596 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 COPAP53621 1224 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 COG7P83436 770 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 BNC1Q01954 994 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 RING1Q06587 406 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 GRIK2Q13002 908 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 ZNF234Q14588 700 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 DCAF12L1Q5VU92 463 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 FAM124AQ86V42 546 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 HSCBQ8IWL3 235 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 ZNF276Q8N554 614 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
HDAC3-204ENST00000469207 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 RBBP8NLQ8NC74 664 aaPredicted RBP12.86□□□□□ -0.35
HDAC3-204ENST00000469207 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 PNPLA8Q9NP80 782 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 CISHQ9NSE2 258 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 ELOVL2Q9NXB9 296 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 SFMBT1Q9UHJ3 866 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 SLC27A6Q9Y2P4 619 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 LAMA5O15230 3695 aa12.86□□□□□ -0.35
HDAC3-204ENST00000469207 EPHX1P07099 455 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 CHKAP35790 457 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 ENPP2Q13822 863 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 COL9A2Q14055 689 aaPredicted RBP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 WDR45BQ5MNZ6 344 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 SYCP2LQ5T4T6 812 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 KRT39Q6A163 491 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 RAB44Q7Z6P3 723 aaPredicted RBP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 MARCH9Q86YJ5 346 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 SIPA1Q96FS4 1042 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 SPATA32Q96LK8 384 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 ULBP1Q9BZM6 244 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 CIPCQ9C0C6 399 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 FAM124BQ9H5Z6 455 aaPredicted RBP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 EIF2B4Q9UI10 523 aaKnown RBP12.85□□□□□ -0.35
HDAC3-204ENST00000469207 PCDHB9Q9Y5E1 797 aa12.85□□□□□ -0.35
HDAC3-204ENST00000469207 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 TMEM8BA6NDV4 472 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 METTL12A8MUP2 240 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 MEI4A8MW99 385 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 KCNK3O14649 394 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 SYNCRIPO60506 623 aaKnown RBP12.84□□□□□ -0.35
HDAC3-204ENST00000469207 FTH1P19P0C7X4 201 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 GNSP15586 552 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
HDAC3-204ENST00000469207 SGSHP51688 502 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 PDE4CQ08493 712 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 STARD3Q14849 445 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 NFIL3Q16649 462 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 KRBA2Q6ZNG9 492 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
HDAC3-204ENST00000469207 RABEPKQ7Z6M1 372 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 TADA2BQ86TJ2 420 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 METTL3Q86U44 580 aaKnown RBP12.84□□□□□ -0.35
HDAC3-204ENST00000469207 NAXDQ8IW45 347 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
HDAC3-204ENST00000469207 CCDC150Q8NCX0 1101 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 UBA3Q8TBC4 463 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 CYB5D2Q8WUJ1 264 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 EDEM1Q92611 657 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 DCLK3Q9C098 648 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 ZNF510Q9Y2H8 683 aa12.84□□□□□ -0.35
HDAC3-204ENST00000469207 A0A1B0GTW7 788 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 PIK3R2O00459 728 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 CBFA2T3O75081 653 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 GABBR2O75899 941 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ZBED1O96006 694 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 CALCAP01258 141 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 MYL1P05976 194 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 HLA-FP30511 346 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 ACSL1P33121 698 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 CSNK1EP49674 416 aaKnown RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
HDAC3-204ENST00000469207 SCAPQ12770 1279 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 SLC14A1Q13336 389 aa12.83□□□□□ -0.36
HDAC3-204ENST00000469207 GOLGA7BQ2TAP0 167 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms