RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 C1orf131Q8NDD1 294 aaKnown RBP13.55□□□□□ -0.24
CLRN1-204ENST00000468836 KCNV2Q8TDN2 545 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 GAB3Q8WWW8 586 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 PPP1R13BQ96KQ4 1090 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 POPDC2Q9HBU9 364 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 POLR3BQ9NW08 1133 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-204ENST00000468836 AJAP1Q9UKB5 411 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-204ENST00000468836 USP18Q9UMW8 372 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 F5P12259 2224 aa13.55□□□□□ -0.24
CLRN1-204ENST00000468836 HRO43593 1189 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 PENKP01210 267 aaPredicted RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 HOXB2P14652 356 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 PTMSP20962 102 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 GBP1P32455 592 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 KIR2DL1P43626 348 aaPredicted RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 YWHAZP63104 245 aaKnown RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 ELF2Q15723 593 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 CRY1Q16526 586 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 EFHC1Q5JVL4 640 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 EMC10Q5UCC4 262 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 OR6B2Q6IFH4 312 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 ANKS1BQ7Z6G8 1248 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 FAM71AQ8IYT1 594 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 PHTF2Q8N3S3 785 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 TMEM35BQ8NCS4 154 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 DQX1Q8TE96 717 aaKnown RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 STK33Q9BYT3 514 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 LHX5Q9H2C1 402 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 FAM204AQ9H8W3 233 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
CLRN1-204ENST00000468836 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 NAALADL1Q9UQQ1 740 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
CLRN1-204ENST00000468836 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 SGK1O00141 431 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 TRIM24O15164 1050 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 PAPSS1O43252 624 aaPredicted RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 GABBR2O75899 941 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 MOCS2O96007 188 aaPredicted RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 NTSR1P30989 418 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 WASP42768 502 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 RPL34P49207 117 aaKnown RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 CDK17Q00537 523 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 UBXN1Q04323 297 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 NNTQ13423 1086 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 DCAF6Q58WW2 860 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 ADGRF1Q5T601 910 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 TAF3Q5VWG9 929 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 FYB2Q5VWT5 728 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 DCLK2Q8N568 766 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 RNF34Q969K3 372 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 TMA16Q96EY4 203 aaKnown RBP13.53□□□□□ -0.24
CLRN1-204ENST00000468836 CIPCQ9C0C6 399 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 EBF1Q9UH73 591 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 SLC12A6Q9UHW9 1150 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 CYTH4Q9UIA0 394 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 TLR6Q9Y2C9 796 aa13.53□□□□□ -0.24
CLRN1-204ENST00000468836 SYNJ2BP-COX16A0A087WUM0 186 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 F8VZ95 297 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 IRAK2O43187 625 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 ACSL4O60488 711 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 HSF2BPO75031 334 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 RHOBTB1O94844 696 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 RETP07949 1114 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 GLI1P08151 1106 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 CYP11B1P15538 503 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 CLCN1P35523 988 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 TPM4P67936 248 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 RING1Q06587 406 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
CLRN1-204ENST00000468836 STARD3Q14849 445 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 SYCP1Q15431 976 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
CLRN1-204ENST00000468836 BEND5Q7L4P6 421 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms