RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ZBED6P86452 979 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 CENPCQ03188 943 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 MTA1Q13330 715 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 DCAF6Q58WW2 860 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 ADGRF1Q5T601 910 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 PHF13Q86YI8 300 aaPredicted RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 DENND1CQ8IV53 801 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 DEFB106AQ8N104 65 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 RNF214Q8ND24 703 aa20.86■□□□□ 0.93
NPHP4-206ENST00000468253 PIWIL1Q96J94 861 aaKnown RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 FBRSL1Q9HCM7 1045 aaKnown RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 BZW2Q9Y6E2 419 aaKnown RBP20.86■□□□□ 0.93
NPHP4-206ENST00000468253 TRUB2O95900 331 aaKnown RBP20.85■□□□□ 0.93
NPHP4-206ENST00000468253 SLC2A3P11169 496 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 TNFAIP3P21580 790 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 NSFP46459 744 aaKnown RBP20.85■□□□□ 0.93
NPHP4-206ENST00000468253 SLC11A2P49281 568 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 ASIC2Q16515 512 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 FSTL4Q6MZW2 842 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 C1orf210Q8IVY1 113 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 ETFBKMTQ8IXQ9 262 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 NT5C3BQ969T7 300 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 PNKPQ96T60 521 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.85■□□□□ 0.93
NPHP4-206ENST00000468253 FBXO10Q9UK96 956 aa20.85■□□□□ 0.93
NPHP4-206ENST00000468253 LUC7L2Q9Y383 392 aaKnown RBP20.85■□□□□ 0.93
NPHP4-206ENST00000468253 KIF26AQ9ULI4 1882 aaPredicted RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 CACNA1HO95180 2353 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 GFRA2O00451 464 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 MSI1O43347 362 aaKnown RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 DAB1O75553 588 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 GZMAP12544 262 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 GRIA2P42262 883 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 GSCP56915 257 aaPredicted RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 ANO4Q32M45 955 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 ACAD10Q6JQN1 1059 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 SARM1Q6SZW1 724 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 VCPIP1Q96JH7 1222 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 FCRL2Q96LA5 508 aaPredicted RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 XPO6Q96QU8 1125 aaKnown RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 DDX50Q9BQ39 737 aaKnown RBP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.84■□□□□ 0.93
NPHP4-206ENST00000468253 ADAM22Q9P0K1 906 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 DEC1Q9P2X7 70 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 SLC12A6Q9UHW9 1150 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 TMEM59LQ9UK28 342 aa20.84■□□□□ 0.93
NPHP4-206ENST00000468253 IRAK2O43187 625 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 CACNG3O60359 315 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 F9P00740 461 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 PENKP01210 267 aaPredicted RBP20.83■□□□□ 0.93
NPHP4-206ENST00000468253 CYBBP04839 570 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 CALB1P05937 261 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 TNFRSF4P43489 277 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 SLC6A11P48066 632 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 C1QBPQ07021 282 aaKnown RBP20.83■□□□□ 0.93
NPHP4-206ENST00000468253 KLHL30Q0D2K2 578 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 PTP4A2Q12974 167 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 NUDT18Q6ZVK8 323 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 TAC4Q86UU9 113 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 DRC7Q8IY82 874 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 SPEM1Q8N4L4 309 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 SLC30A5Q8TAD4 765 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 PGAP3Q96FM1 320 aaPredicted RBP20.83■□□□□ 0.93
NPHP4-206ENST00000468253 BBS2Q9BXC9 721 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 HAUS4Q9H6D7 363 aa20.83■□□□□ 0.93
NPHP4-206ENST00000468253 COL4A2P08572 1712 aa20.83■□□□□ 0.92
NPHP4-206ENST00000468253 KCNU1A8MYU2 1149 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 ACSL4O60488 711 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 ATG13O75143 517 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 GRAP2O75791 330 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 TYRP14679 529 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 TRIM14Q14142 442 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 SLC25A52Q3SY17 297 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 MPPE1Q53F39 396 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 MPP7Q5T2T1 576 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 FAM102AQ5T9C2 384 aaPredicted RBP20.82■□□□□ 0.92
NPHP4-206ENST00000468253 MMS22LQ6ZRQ5 1243 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 TPGS1Q6ZTW0 290 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 ZNF571Q7Z3V5 609 aaPredicted RBP20.82■□□□□ 0.92
NPHP4-206ENST00000468253 KCNV2Q8TDN2 545 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 TMA16Q96EY4 203 aaKnown RBP20.82■□□□□ 0.92
NPHP4-206ENST00000468253 NPY6RQ99463 290 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 SLC2A11Q9BYW1 496 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 STAP1Q9ULZ2 295 aa20.82■□□□□ 0.92
NPHP4-206ENST00000468253 TICRRQ7Z2Z1 1910 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 CHURC1-FNTBB4DL54 471 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 TULP3O75386 442 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 EGFP01133 1207 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 GYPCP04921 128 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 APODP05090 189 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 HNRNPH3P31942 346 aaKnown RBP20.81■□□□□ 0.92
NPHP4-206ENST00000468253 CCR1P32246 355 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 PTPN5P54829 565 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 RNASE9P60153 205 aaKnown RBP20.81■□□□□ 0.92
NPHP4-206ENST00000468253 MTAPQ13126 283 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 PPP2R5DQ14738 602 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 FYB2Q5VWT5 728 aa20.81■□□□□ 0.92
NPHP4-206ENST00000468253 NAIF1Q69YI7 327 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms