RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 TXNDC5Q8NBS9 432 aaKnown RBP15.24■□□□□ 0.03
COMMD3-206ENST00000468179 DDI1Q8WTU0 396 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 UCMAQ8WVF2 138 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 FAM149B1Q96BN6 582 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 SERPINB11Q96P15 392 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 SFMBT1Q9UHJ3 866 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 FBXO10Q9UK96 956 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 PCDHGC3Q9UN70 934 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 SLC27A6Q9Y2P4 619 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 ZFHX2Q9C0A1 2572 aaPredicted RBP15.24■□□□□ 0.03
COMMD3-206ENST00000468179 FANCMQ8IYD8 2048 aa15.24■□□□□ 0.03
COMMD3-206ENST00000468179 BECN2A8MW95 431 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 NPC1O15118 1278 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 RHOBTB1O94844 696 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 CALCAP01258 141 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 SDHBP21912 280 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 NTSR1P30989 418 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 NNTQ13423 1086 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 ADGRF1Q5T601 910 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 EMC10Q5UCC4 262 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 FAM217AQ8IXS0 508 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 KIAA2013Q8IYS2 634 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 ZNF557Q8N988 423 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-206ENST00000468179 AZIN2Q96A70 460 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 NAT10Q9H0A0 1025 aaKnown RBP15.23■□□□□ 0.03
COMMD3-206ENST00000468179 PDCL3Q9H2J4 239 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 STOML2Q9UJZ1 356 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 DAAM1Q9Y4D1 1078 aa15.23■□□□□ 0.03
COMMD3-206ENST00000468179 FOXN3O00409 490 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-206ENST00000468179 GFRA2O00451 464 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 IRAK2O43187 625 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 TIMM44O43615 452 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 GLI1P08151 1106 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 CISD3P0C7P0 127 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 TBX4P57082 545 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 YWHAZP63104 245 aaKnown RBP15.22■□□□□ 0.03
COMMD3-206ENST00000468179 MYL5Q02045 173 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 APBA1Q02410 837 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 SRSF5Q13243 272 aaKnown RBP15.22■□□□□ 0.03
COMMD3-206ENST00000468179 PDCLQ13371 301 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 RAPGEF1Q13905 1077 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 ELF2Q15723 593 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 LPAL2Q16609 132 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 KLHDC7AQ5VTJ3 777 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 CDKAL1Q5VV42 579 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 FYB2Q5VWT5 728 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 RASSF3Q86WH2 238 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 DCLK2Q8N568 766 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 BHMTQ93088 406 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 TMA16Q96EY4 203 aaKnown RBP15.22■□□□□ 0.03
COMMD3-206ENST00000468179 POPDC2Q9HBU9 364 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 PLK2Q9NYY3 685 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
COMMD3-206ENST00000468179 TLR6Q9Y2C9 796 aa15.22■□□□□ 0.03
COMMD3-206ENST00000468179 TYW5A2RUC4 315 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 PRR5-ARHGAP8B1AHC4 643 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 E5RJQ4 531 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 SGK1O00141 431 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 ARHGAP8P85298 464 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 LMNB2Q03252 620 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 KCNMA1Q12791 1236 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 PDAP1Q13442 181 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 DRAP1Q14919 205 aaPredicted RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 EIF4HQ15056 248 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 EFHC1Q5JVL4 640 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 MPP7Q5T2T1 576 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 ANO7Q6IWH7 933 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 CHPFQ8IZ52 775 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 FAM160A2Q8N612 972 aaPredicted RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 CLEC4CQ8WTT0 213 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 ZC3H10Q96K80 434 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 PPP1R13BQ96KQ4 1090 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 LSM14BQ9BX40 385 aaKnown RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 STK33Q9BYT3 514 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 VPS16Q9H269 839 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 SYNCQ9H7C4 482 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
COMMD3-206ENST00000468179 ASNSD1Q9NWL6 643 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 TAB2Q9NYJ8 693 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 SLC12A6Q9UHW9 1150 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 USP18Q9UMW8 372 aa15.21■□□□□ 0.03
COMMD3-206ENST00000468179 PAPSS1O43252 624 aaPredicted RBP15.2■□□□□ 0.02
COMMD3-206ENST00000468179 MSI1O43347 362 aaKnown RBP15.2■□□□□ 0.02
COMMD3-206ENST00000468179 IGLV3-27P01718 113 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 APOEP02649 317 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 HOXB2P14652 356 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
COMMD3-206ENST00000468179 UCHL3P15374 230 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 GBP1P32455 592 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 CLCN1P35523 988 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 ARID5AQ03989 594 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 MTA1Q13330 715 aa15.2■□□□□ 0.02
COMMD3-206ENST00000468179 KRT31Q15323 416 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms