RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DDIT4Q9NX09 232 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 PRG3Q9Y2Y8 225 aaPredicted RBP10.56□□□□□ -0.72
MSH5-213ENST00000468136 TSC2P49815 1807 aa10.56□□□□□ -0.72
MSH5-213ENST00000468136 A0A087WUV0 522 aaPredicted RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 E7ESA3 106 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 I3L4J1 428 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 AP3B1O00203 1094 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 RASGRF2O14827 1237 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TP73O15350 636 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 FGF10O15520 208 aaPredicted RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 TBC1D4O60343 1298 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 OPHN1O60890 802 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 IGLV3-25P01717 112 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 AMHP03971 560 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 FYNP06241 537 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 CLTBP09497 229 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 CCR1P32246 355 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 MAGEA4P43358 317 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 GJA8P48165 433 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 ALDH7A1P49419 539 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 GLUD2P49448 558 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 NDUFV1P49821 464 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 SLC5A3P53794 718 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 YWHAGP61981 247 aaKnown RBP eCLIP10.55□□□□□ -0.72
MSH5-213ENST00000468136 CREMQ03060 361 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 SEMA3BQ13214 749 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TRIP13Q15645 432 aaPredicted RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 HIF1AQ16665 826 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 PAN2Q504Q3 1202 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 SLC39A12Q504Y0 691 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 DNAJC21Q5F1R6 531 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 RFX8Q6ZV50 586 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 BHLHA9Q7RTU4 235 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 CCDC25Q86WR0 208 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 FAM131BQ86XD5 332 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TDRPQ86YL5 185 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 NAT8LQ8N9F0 302 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 HASPINQ8TF76 798 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TFB1MQ8WVM0 346 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 OLFM3Q96PB7 478 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 VAT1Q99536 393 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 EPB41L4BQ9H329 900 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 SEMA4AQ9H3S1 761 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 SMOC2Q9H3U7 446 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 USP29Q9HBJ7 922 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 ARHGEF38Q9NXL2 777 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
MSH5-213ENST00000468136 CWC15Q9P013 229 aaKnown RBP10.55□□□□□ -0.72
MSH5-213ENST00000468136 CACNG4Q9UBN1 327 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 SLC12A6Q9UHW9 1150 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 NAALADL1Q9UQQ1 740 aa10.55□□□□□ -0.72
MSH5-213ENST00000468136 COL4A4P53420 1690 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 TBKBP1A7MCY6 615 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 E7EVH7 732 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 KCNN4O15554 427 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 IRAK2O43187 625 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CDH16O75309 829 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 DGKIO75912 1065 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 BAIAP3O94812 1187 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 ITGB1P05556 798 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 PECAM1P16284 738 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 TPSB2P20231 275 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 NR1D1P20393 614 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 SLC11A1P49279 550 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 VPS41P49754 854 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TPI1P60174 286 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 NME3Q13232 169 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 DPYSQ14117 519 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CA9Q16790 459 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CCDC142Q17RM4 750 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TTMPQ5BVD1 217 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 OTUD1Q5VV17 481 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 SYPL2Q5VXT5 272 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 NCBP2-AS2Q69YL0 99 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CMTR2Q8IYT2 770 aaKnown RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 VPS52Q8N1B4 723 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CCDC185Q8N715 623 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 ATP11CQ8NB49 1132 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms