RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 HOXB2P14652 356 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 ST6GAL1P15907 406 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 CPA2P48052 419 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 STIM1Q13586 685 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 SEMA3AQ14563 771 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM110CQ1W6H9 321 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 KIAA0753Q2KHM9 967 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 DARS2Q6PI48 645 aaKnown RBP3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 KRT78Q8N1N4 520 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 FSTL5Q8N475 847 aaPredicted RBP3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 FAM71DQ8N9W8 422 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 IPCEF1Q8WWN9 437 aaPredicted RBP3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 RXFP3Q9NSD7 469 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 ARL8BQ9NVJ2 186 aa3.53□□□□□ -1.84
GTF3C3-209ENST00000466862 VSTM5A8MXK1 200 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 F8W810 466 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 SPTLC2O15270 562 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 CTIFO43310 598 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 KCNQ3O43525 872 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 DUSP1P28562 367 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 SLC5A2P31639 672 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 RGS19P49795 217 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 DGKQP52824 942 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 SLC12A2P55011 1212 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 DMWDQ09019 674 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 DAB2IPQ5VWQ8 1189 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 P3H2Q8IVL5 708 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 C16orf71Q8IYS4 520 aaPredicted RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 CLASRPQ8N2M8 674 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 SMRP1Q8NCR6 262 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 GJA10Q969M2 543 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 CTAGE1Q96RT6 745 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 STRBPQ96SI9 672 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 UNKQ9C0B0 810 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 HIPK2Q9H2X6 1198 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 HEYLQ9NQ87 328 aaPredicted RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 PAPOLBQ9NRJ5 636 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 AGO2Q9UKV8 859 aaKnown RBP3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 PCDHB2Q9Y5E7 798 aa3.52□□□□□ -1.85
GTF3C3-209ENST00000466862 A0A1W2PPC1 479 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 OR2W5A6NFC9 320 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 DHHO43323 396 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 S100BP04271 92 aaPredicted RBP3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 TSHRP16473 764 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 RPL17P18621 184 aaKnown RBP3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 HOXD12P35452 270 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 ZNF84P51523 738 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 DAG1Q14118 895 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 CNGA3Q16281 694 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 LVRNQ6Q4G3 990 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 DLK2Q6UY11 383 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 RFX8Q6ZV50 586 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 RNF152Q8N8N0 203 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 ZFPM2Q8WW38 1151 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 PIGKQ92643 395 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 AKAP1Q92667 903 aaKnown RBP eCLIP3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 SLC25A28Q96A46 364 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 NLRP4Q96MN2 994 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 PIMREGQ9BSJ6 248 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 MLXIPQ9HAP2 919 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 ASNSD1Q9NWL6 643 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 PCDHGB6Q9Y5F9 930 aa3.51□□□□□ -1.85
GTF3C3-209ENST00000466862 SPATA31A5Q5VU36 1347 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 SPATA31A7Q8IWB4 1347 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 TMEM272A0A1B0GTI8 110 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 NDUFB8O95169 186 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 WNT1P04628 370 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 CD63P08962 238 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 PLA2G2AP14555 144 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 TFEBP19484 476 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 MATN1P21941 496 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ATICP31939 592 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 GPS1Q13098 491 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 MTA1Q13330 715 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 PGM5Q15124 567 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 INPP5JQ15735 1006 aaPredicted RBP3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ZNF474Q6S9Z5 364 aaPredicted RBP3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 CRTC1Q6UUV9 634 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 KIAA0408Q6ZU52 694 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 SDR16C5Q8N3Y7 309 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 SLC44A5Q8NCS7 719 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ASB5Q8WWX0 329 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ASB12Q8WXK4 309 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 JDP2Q8WYK2 163 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 CELF1Q92879 486 aaKnown RBP3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 PHKBQ93100 1093 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ZNF845Q96IR2 970 aaPredicted RBP3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 ZNF479Q96JC4 524 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 SENP7Q9BQF6 1050 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 CDCP1Q9H5V8 836 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 MRPL44Q9H9J2 332 aaKnown RBP3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 THSD1Q9NS62 852 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 TBC1D23Q9NUY8 699 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 OBP2AQ9NY56 170 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 COG5Q9UP83 839 aa3.5□□□□□ -1.85
GTF3C3-209ENST00000466862 FRMPD2Q68DX3 1309 aaPredicted RBP3.49□□□□□ -1.85
GTF3C3-209ENST00000466862 KIR2DS5A0A0G2JLQ3 304 aa3.49□□□□□ -1.85
GTF3C3-209ENST00000466862 GXYLT2A0PJZ3 443 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms