RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EZH1Q92800 747 aaPredicted RBP13.42□□□□□ -0.26
PDZRN3-205ENST00000466780 CCDC124Q96CT7 223 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-205ENST00000466780 KLHL4Q9C0H6 718 aa13.42□□□□□ -0.26
PDZRN3-205ENST00000466780 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
PDZRN3-205ENST00000466780 ITGA11Q9UKX5 1188 aa13.42□□□□□ -0.26
PDZRN3-205ENST00000466780 APOL1O14791 398 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 OPHN1O60890 802 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 KLHL2O95198 593 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PRKCBP05771 671 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 IDH3AP50213 366 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SERPINB9P50453 376 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 LSAMPQ13449 338 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SURF1Q15526 300 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ZNF667Q5HYK9 610 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 RSPH3Q86UC2 560 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ACTRT2Q8TDY3 377 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SORT1Q99523 831 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SIKE1Q9BRV8 207 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PNPOQ9NVS9 261 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 MOCS1Q9NZB8 636 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ANK1P16157 1881 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 B4GALT4O60513 344 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 MAFO75444 373 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ALDOAP04075 364 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PRKCGP05129 697 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 TGM2P21980 687 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 EFNA5P52803 228 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PEX6Q13608 980 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PCLAFQ15004 111 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SLC9A4Q6AI14 798 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 TMEM192Q8IY95 271 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 HIPK4Q8NE63 616 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 CYP4F11Q9HBI6 524 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 POMPQ9Y244 141 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 COMMD3-BMI1R4GMX3 469 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 LCTP09848 1927 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 A6NJR5 290 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 H3BNX3 289 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ZNF195O14628 629 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 CILPO75339 1184 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ITGAXP20702 1163 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 CYP3A5P20815 502 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 PDE1CQ14123 709 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 DBN1Q16643 649 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 CCDC14Q49A88 953 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 VWA5B1Q5TIE3 1220 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 SCYL2Q6P3W7 929 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 FBXL19Q6PCT2 694 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 FAM183BPQ6ZVS7 135 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 HPS6Q86YV9 775 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 NAT14Q8WUY8 206 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 TFB1MQ8WVM0 346 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 VCX3BQ9H321 246 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 STN1Q9H668 368 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 VCX3AQ9NNX9 186 aa13.41□□□□□ -0.26
PDZRN3-205ENST00000466780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 PLIN3O60664 434 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 PDK2Q15119 407 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 STXBP5Q5T5C0 1151 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 EEF1DP3Q658K8 133 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 OR6B2Q6IFH4 312 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 DPH6Q7L8W6 267 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 CCDC33Q8N5R6 958 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.26
PDZRN3-205ENST00000466780 TPP1O14773 563 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 B4GALT5O43286 388 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 OR6B1O95007 311 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 CXCL8P10145 99 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 RAG1P15918 1043 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 PROZP22891 400 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 ICAM3P32942 547 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 XIAPP98170 497 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 LAMTOR4Q0VGL1 99 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 PDK3Q15120 406 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 TRIP10Q15642 601 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 TCHHL1Q5QJ38 904 aaPredicted RBP13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 UGT2A3Q6UWM9 527 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 SATL1Q86VE3 508 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 C10orf107Q8IVU9 208 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 MAP7D3Q8IWC1 876 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 DEFB107AQ8IZN7 70 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 PHTF2Q8N3S3 785 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 RNF149Q8NC42 400 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms