RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 OTUD6BQ8N6M0 293 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 SLC2A13Q96QE2 648 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 HERPUD2Q9BSE4 406 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 PABPC3Q9H361 631 aaKnown RBP19.35■□□□□ 0.69
CAPN3-209ENST00000466222 ENTPD7Q9NQZ7 604 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 MTRF1LQ9UGC7 380 aaKnown RBP19.35■□□□□ 0.69
CAPN3-209ENST00000466222 USP18Q9UMW8 372 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
CAPN3-209ENST00000466222 E7EVH7 732 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 DPYSL4O14531 572 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 CAPN9O14815 690 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 PMS2P54278 862 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 RWDD2BP57060 319 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 ODF2Q5BJF6 829 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 PACS2Q86VP3 889 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 RAPGEF5Q92565 580 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 RNF25Q96BH1 459 aaPredicted RBP19.35■□□□□ 0.69
CAPN3-209ENST00000466222 CENPTQ96BT3 561 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 RABEP2Q9H5N1 569 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 RXFP1Q9HBX9 757 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 TMPRSS4Q9NRS4 437 aa19.35■□□□□ 0.69
CAPN3-209ENST00000466222 NOVA2Q9UNW9 492 aaKnown RBP19.35■□□□□ 0.69
CAPN3-209ENST00000466222 A0A1W2PQH9 124 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 TCRBV7S2A1N4TA0A589 114 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 CARNS1A5YM72 827 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 ANKRD65E5RJM6 399 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 TGM5O43548 720 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 DAB1O75553 588 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 RNF8O76064 485 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 SULT1E1P49888 294 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 NME3Q13232 169 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 ARCQ7LC44 396 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 MICAL1Q8TDZ2 1067 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 C2orf15Q8WU43 125 aaKnown RBP19.34■□□□□ 0.69
CAPN3-209ENST00000466222 PLVAPQ9BX97 442 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 GPATCH2LQ9NWQ4 482 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 GMIPQ9P107 970 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 ATP8A1Q9Y2Q0 1164 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 TRANK1O15050 2925 aa19.34■□□□□ 0.69
CAPN3-209ENST00000466222 CAPN15O75808 1086 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 FSBPO95073 299 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 TRUB2O95900 331 aaKnown RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 NOS2P35228 1153 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 PTPN9P43378 593 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 FNTAP49354 379 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 YWHAGP61981 247 aaKnown RBP eCLIP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 BYSLQ13895 437 aaKnown RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 SLC25A52Q3SY17 297 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 ZFYVE27Q5T4F4 411 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 PRELID2Q8N945 189 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 MRPL43Q8N983 215 aaKnown RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 C12orf50Q8NA57 414 aaPredicted RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 SLC7A14Q8TBB6 771 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 CENPIQ92674 756 aaPredicted RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 NT5C3BQ969T7 300 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 MAGOHBQ96A72 148 aaKnown RBP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 PGM2Q96G03 612 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 NPY6RQ99463 290 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 TMEM109Q9BVC6 243 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 FNIP2Q9P278 1114 aa19.33■□□□□ 0.69
CAPN3-209ENST00000466222 BCCIPQ9P287 314 aaKnown RBP eCLIP19.33■□□□□ 0.69
CAPN3-209ENST00000466222 REV3LO60673 3130 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 C2orf71A6NGG8 1288 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 SLC38A8A6NNN8 435 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 C5orf67F2Z3F1 127 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 M0QYT0 321 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 PSTPIP1O43586 416 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 CD48P09326 243 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 RARAP10276 462 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 TAF10Q12962 218 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 SLMAPQ14BN4 828 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 TPGS2Q68CL5 300 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 DENND2CQ68D51 928 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 ZDHHC24Q6UX98 284 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 FAM131BQ86XD5 332 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 ZDHHC14Q8IZN3 488 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 HSPH1Q92598 858 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 SPATA17Q96L03 361 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 KLHL5Q96PQ7 755 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 HEMGNQ9BXL5 484 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 TRIM31Q9BZY9 425 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 TLR9Q9NR96 1032 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 PIGVQ9NUD9 493 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 IL37Q9NZH6 218 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 SCML2Q9UQR0 700 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 YIPF1Q9Y548 306 aa19.33■□□□□ 0.68
CAPN3-209ENST00000466222 EYSQ5T1H1 3165 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 C5orf60A6NFR6 353 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 PRRG1O14668 218 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 TUFMP49411 452 aaKnown RBP19.32■□□□□ 0.68
CAPN3-209ENST00000466222 LIG3P49916 1009 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 MAGOHP61326 146 aaKnown RBP19.32■□□□□ 0.68
CAPN3-209ENST00000466222 RPL10AP62906 217 aaKnown RBP19.32■□□□□ 0.68
CAPN3-209ENST00000466222 ADCY2Q08462 1091 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 CA9Q16790 459 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 CCDC185Q8N715 623 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 IRGQQ8WZA9 623 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 NKX2-4Q9H2Z4 354 aa19.32■□□□□ 0.68
CAPN3-209ENST00000466222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.32■□□□□ 0.68
CAPN3-209ENST00000466222 PCDHA11Q9Y5I1 949 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms