RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 KCNV2Q8TDN2 545 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 ACP6Q9NPH0 428 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 EFR3BQ9Y2G0 817 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 TRPM7Q96QT4 1865 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 POC1B-GALNT4F8VUJ3 575 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 HAS3O00219 553 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 AHCYL1O43865 530 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 ERBB2P04626 1255 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 PTPN7P35236 360 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 ZNF135P52742 658 aaPredicted RBP7.92□□□□□ -1.14
USP54-210ENST00000466048 CRLF3Q8IUI8 442 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 TMCO5AQ8N6Q1 288 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 UHMK1Q8TAS1 419 aaKnown RBP7.92□□□□□ -1.14
USP54-210ENST00000466048 SEC14L1Q92503 715 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 KRT35Q92764 455 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 ACSF2Q96CM8 615 aaPredicted RBP7.92□□□□□ -1.14
USP54-210ENST00000466048 CATSPER2Q96P56 530 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 TRIM56Q9BRZ2 755 aaKnown RBP7.92□□□□□ -1.14
USP54-210ENST00000466048 FAM192AQ9GZU8 254 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 MRPL46Q9H2W6 279 aaKnown RBP7.92□□□□□ -1.14
USP54-210ENST00000466048 CYLDQ9NQC7 956 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 GGA2Q9UJY4 613 aa7.92□□□□□ -1.14
USP54-210ENST00000466048 PYGMP11217 842 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 DNAJB2P25686 324 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PSEN1P49768 467 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 SLC12A2P55011 1212 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 WNT7BP56706 349 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 TMED2Q15363 201 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 FAM102AQ5T9C2 384 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 FAM171A1Q5VUB5 890 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 GSPT2Q8IYD1 628 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 SPATA18Q8TC71 538 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 SNF8Q96H20 258 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 XPO6Q96QU8 1125 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 SYT15Q9BQS2 421 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 OSBPL8Q9BZF1 889 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 KDM4CQ9H3R0 1056 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 ZWILCHQ9H900 591 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CNTN3Q9P232 1028 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 ARHGAP26Q9UNA1 814 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 MCM3APO60318 1980 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 TTLL13PA6NNM8 815 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 SMAPO00193 183 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 SERPINI2O75830 405 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 KRT8P05787 483 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 KRT4P19013 534 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 AVPR1AP37288 418 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PMS2P54278 862 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 STX1BP61266 288 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PURAQ00577 322 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 GUCY1A3Q02108 690 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CCL14Q16627 93 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 MCEEQ96PE7 176 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 ABI2Q9NYB9 513 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 PADI3Q9ULW8 664 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 KAT6AQ92794 2004 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 A0A1W2PQ45 241 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 A0A1W2PQY0 241 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PITPNM1O00562 1244 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 BNIP3LO60238 219 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 DAB1O75553 588 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 FSBPO95073 299 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 KPNA2P52292 529 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 EPHB1P54762 984 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 MARCH8Q5T0T0 291 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 DCAF12L1Q5VU92 463 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 DUPD1Q68J44 220 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 LCLAT1Q6UWP7 414 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 YTHDF3Q7Z739 585 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 RASSF3Q86WH2 238 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 UNC45BQ8IWX7 931 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 SRRM1Q8IYB3 904 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 RIN2Q8WYP3 895 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 CASP10Q92851 521 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 TLR8Q9NR97 1041 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 DLGAP2Q9P1A6 1054 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 GPR32O75388 356 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 AP1G2O75843 785 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PDE5AO76074 875 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 MICAL2O94851 1124 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CSH1P0DML2 217 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CSH2P0DML3 217 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CYBAP13498 195 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 CST5P28325 142 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 HSPA13P48723 471 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PPARDQ03181 441 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 ANO4Q32M45 955 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 GLRA4Q5JXX5 417 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 ITPRIPL1Q6GPH6 555 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 TRMT10CQ7L0Y3 403 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 ADAT2Q7Z6V5 191 aaKnown RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 PCGF5Q86SE9 256 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 HERC6Q8IVU3 1022 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 PRELID2Q8N945 189 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 USP13Q92995 863 aaPredicted RBP7.91□□□□□ -1.14
USP54-210ENST00000466048 FBXO32Q969P5 355 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 BTBD6Q96KE9 485 aa7.91□□□□□ -1.14
USP54-210ENST00000466048 GAD1Q99259 594 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms