RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TCHHL1Q5QJ38 904 aaPredicted RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 SYCP2LQ5T4T6 812 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 ACBD5Q5T8D3 534 aaPredicted RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 ZFP1Q6P2D0 407 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 NPNTQ6UXI9 565 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 BRSK2Q8IWQ3 736 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 ZBTB45Q96K62 511 aaPredicted RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 PRMT6Q96LA8 375 aaPredicted RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 EBNA1BP2Q99848 306 aaKnown RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 BCAP29Q9UHQ4 241 aa20.37■□□□□ 0.85
SDF4-205ENST00000465727 PRPF19Q9UMS4 504 aaKnown RBP20.37■□□□□ 0.85
SDF4-205ENST00000465727 KCNN4O15554 427 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 LYPLA1O75608 230 aaPredicted RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 APRTP07741 180 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 CCDC130P13994 396 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 PRKCEQ02156 737 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 MTMR2Q13614 643 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 KRT81Q14533 505 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 EMC2Q15006 297 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 DENND1BQ6P3S1 775 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 XYLT1Q86Y38 959 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 DEPTORQ8TB45 409 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 DEPDC1BQ8WUY9 529 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 TFB1MQ8WVM0 346 aaKnown RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 SERPINI1Q99574 410 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 GCOM2Q9BZD3 368 aaPredicted RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 STK39Q9UEW8 545 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 DCDC2Q9UHG0 476 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 PCDHA11Q9Y5I1 949 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 BCLAF3A2AJT9 711 aaKnown RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 ADCY3O60266 1144 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 SORBS2O94875 1100 aaKnown RBP20.36■□□□□ 0.85
SDF4-205ENST00000465727 SWSAP1Q6NVH7 229 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 FRMD7Q6ZUT3 714 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 MAVSQ7Z434 540 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 METTL25Q8N6Q8 603 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 HIPK4Q8NE63 616 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 SH3BP1Q9Y3L3 701 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 TELO2Q9Y4R8 837 aa20.36■□□□□ 0.85
SDF4-205ENST00000465727 A0A0J9YVX5 310 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 CCDC160A6NGH7 325 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 PLIN3O60664 434 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 COX4I1P13073 169 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 TGM2P21980 687 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 NR1H2P55055 460 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 CDH6P55285 790 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 HDAC4P56524 1084 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 MYL6P60660 151 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
SDF4-205ENST00000465727 DCTN2Q13561 401 aaKnown RBP20.35■□□□□ 0.85
SDF4-205ENST00000465727 TAF5Q15542 800 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 ARHGEF16Q5VV41 709 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 METTL21CQ5VZV1 264 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 OLFML2BQ68BL8 750 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 LRRC43Q8N309 656 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 EMC1Q8N766 993 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 ADCY4Q8NFM4 1077 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 ZFP28Q8NHY6 868 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 FAM151AQ8WW52 585 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 USP6NLQ92738 828 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 SIGLEC10Q96LC7 697 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 LRGUKQ96M69 825 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 CAMKK2Q96RR4 588 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 TARS2Q9BW92 718 aaKnown RBP20.35■□□□□ 0.85
SDF4-205ENST00000465727 UBAP1Q9NZ09 502 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 EMCNQ9ULC0 261 aa20.35■□□□□ 0.85
SDF4-205ENST00000465727 G3BP2Q9UN86 482 aaKnown RBP20.35■□□□□ 0.85
SDF4-205ENST00000465727 CRTAMO95727 393 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 ZBED1O96006 694 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 CPA3P15088 417 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 TPSB2P20231 275 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 HARS2P49590 506 aaKnown RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 SFSWAPQ12872 951 aaKnown RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 APOFQ13790 326 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 PCLAFQ15004 111 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 TPSAB1Q15661 275 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 INSCQ1MX18 579 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 XKR3Q5GH77 459 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 N4BP2L1Q5TBK1 243 aaPredicted RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 DNAJC1Q96KC8 554 aaKnown RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 RNF157Q96PX1 679 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 SORT1Q99523 831 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 PORCNQ9H237 461 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 IFT122Q9HBG6 1241 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.34■□□□□ 0.85
SDF4-205ENST00000465727 MOCS1Q9NZB8 636 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 AP4B1Q9Y6B7 739 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 ZNF195O14628 629 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 FBXO21O94952 628 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 SRGAP2CP0DJJ0 459 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 SRGAP2BP0DMP2 458 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 CDK4P11802 303 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 SCNN1BP51168 640 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 MMRN1Q13201 1228 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 TRMT10BQ6PF06 316 aaKnown RBP20.34■□□□□ 0.85
SDF4-205ENST00000465727 CPXCR1Q8N123 301 aa20.34■□□□□ 0.85
SDF4-205ENST00000465727 DIS3LQ8TF46 1054 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms