RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 ADAM22Q9P0K1 906 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 DLGAP2Q9P1A6 1054 aa12.15□□□□□ -0.46
CUX1-207ENST00000465461 XPO7Q9UIA9 1087 aaKnown RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 MRPS17Q9Y2R5 130 aaKnown RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 HBS1LQ9Y450 684 aaKnown RBP12.15□□□□□ -0.46
CUX1-207ENST00000465461 ITIH6Q6UXX5 1313 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 MIA3Q5JRA6 1907 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 M0QYT0 321 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 DDX3XO00571 662 aaKnown RBP eCLIP12.14□□□□□ -0.47
CUX1-207ENST00000465461 ADH1CP00326 375 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 TPM3P06753 285 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 GLI1P08151 1106 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 HOXC13P31276 330 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 FLT3P36888 993 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 HARS2P49590 506 aaKnown RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 SULT1E1P49888 294 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 SGSHP51688 502 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 ATXN1P54253 815 aaKnown RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 MLLT6P55198 1093 aaPredicted RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 CDK17Q00537 523 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 CENPCQ03188 943 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 GAD2Q05329 585 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 KDSRQ06136 332 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 RAB6CQ53S08 254 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 TMEM196Q5HYL7 178 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 OTUD1Q5VV17 481 aaPredicted RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 HGSNATQ68CP4 663 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 SPECC1LQ69YQ0 1117 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 NADSYN1Q6IA69 706 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 ACAD10Q6JQN1 1059 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 RFWD3Q6PCD5 774 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 ZNF397Q8NF99 534 aaPredicted RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 JOSD2Q8TAC2 188 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 CD101Q93033 1021 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 OTUB2Q96DC9 234 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 SLC39A13Q96H72 371 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 SERPINB11Q96P15 392 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
CUX1-207ENST00000465461 BBS2Q9BXC9 721 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 DCLK3Q9C098 648 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 RAB6CQ9H0N0 254 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 FAM204AQ9H8W3 233 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 POLR3BQ9NW08 1133 aaPredicted RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 DDIT4Q9NX09 232 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.14□□□□□ -0.47
CUX1-207ENST00000465461 TMEM59LQ9UK28 342 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 CLEC4EQ9ULY5 219 aa12.14□□□□□ -0.47
CUX1-207ENST00000465461 LUC7L2Q9Y383 392 aaKnown RBP12.14□□□□□ -0.47
CUX1-207ENST00000465461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.14□□□□□ -0.472e-11■□□□□ 9.3
CUX1-207ENST00000465461 IRAK2O43187 625 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
CUX1-207ENST00000465461 IGLV3-25P01717 112 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TYRP14679 529 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 COL9A1P20849 921 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 SLC6A4P31645 630 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 NOS2P35228 1153 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 PRKCIP41743 596 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 MATKP42679 507 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 ADKP55263 362 aaKnown RBP12.13□□□□□ -0.47
CUX1-207ENST00000465461 SEC13P55735 322 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 GRSF1Q12849 480 aaKnown RBP eCLIP12.13□□□□□ -0.47
CUX1-207ENST00000465461 EIF4EBP2Q13542 120 aaPredicted RBP12.13□□□□□ -0.47
CUX1-207ENST00000465461 GAS6Q14393 721 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TDRD12Q587J7 1177 aaKnown RBP12.13□□□□□ -0.47
CUX1-207ENST00000465461 PKN3Q6P5Z2 889 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 MON1BQ7L1V2 547 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 BEND5Q7L4P6 421 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TMC6Q7Z403 805 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
CUX1-207ENST00000465461 KIAA1958Q8N8K9 716 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 DTWD2Q8NBA8 298 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 RNF34Q969K3 372 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 CLDN23Q96B33 292 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 MSANTD3Q96H12 275 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TBCBQ99426 244 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 NELL2Q99435 816 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 ZDHHC4Q9NPG8 344 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TMPRSS4Q9NRS4 437 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 C2orf42Q9NWW7 574 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 TLR6Q9Y2C9 796 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
CUX1-207ENST00000465461 ATG2BQ96BY7 2078 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 HOXC11O43248 304 aaPredicted RBP12.12□□□□□ -0.47
CUX1-207ENST00000465461 ACSL4O60488 711 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 TULP3O75386 442 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 RRM1P23921 792 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 GGCXP38435 758 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 ATP11AP98196 1134 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 AMPD2Q01433 879 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 MTAPQ13126 283 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 CCINQ13939 588 aa12.12□□□□□ -0.47
CUX1-207ENST00000465461 C15orf59Q2T9L4 293 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms