RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 LTB4R2Q9NPC1 389 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 SPHK2Q9NRA0 654 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TJP2Q9UDY2 1190 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 TMEM59LQ9UK28 342 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 NUDT5Q9UKK9 219 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 NAALADL1Q9UQQ1 740 aa14.28□□□□□ -0.12
LIMD1-203ENST00000465039 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 APOEP02649 317 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 KLKB1P03952 638 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ADH5P11766 374 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ARSAP15289 507 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 CCR1P32246 355 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 GJA4P35212 333 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 PTPN9P43378 593 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ZNF75DP51815 510 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 LRRC32Q14392 662 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 FBXO43Q4G163 708 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
LIMD1-203ENST00000465039 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ADGRF1Q5T601 910 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 SYPL2Q5VXT5 272 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 CWF19L1Q69YN2 538 aaKnown RBP14.27□□□□□ -0.13
LIMD1-203ENST00000465039 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 TAC4Q86UU9 113 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 GPIHBP1Q8IV16 184 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 DEFB106AQ8N104 65 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ZNF687Q8N1G0 1237 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 FAM3CQ92520 227 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 BTN2A3PQ96KV6 586 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 FCRL2Q96LA5 508 aaPredicted RBP14.27□□□□□ -0.13
LIMD1-203ENST00000465039 NPY6RQ99463 290 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 C11orf70Q9BRQ4 267 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 KCNH6Q9H252 994 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 FAM204AQ9H8W3 233 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 ABHD10Q9NUJ1 306 aa14.27□□□□□ -0.13
LIMD1-203ENST00000465039 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
LIMD1-203ENST00000465039 MIA3Q5JRA6 1907 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SHISA7A6NL88 538 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SIGLEC16A6NMB1 481 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 GFRA2O00451 464 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 CACNG3O60359 315 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 RTN2O75298 545 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
LIMD1-203ENST00000465039 IRF1P10914 325 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 DESP17661 470 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 DRD1P21728 446 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 CDC25BP30305 580 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
LIMD1-203ENST00000465039 TAF5Q15542 800 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 BRMS1LQ5PSV4 323 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 RNF43Q68DV7 783 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 TRIM68Q6AZZ1 485 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 RHBDF2Q6PJF5 856 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 BNIPLQ7Z465 357 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 ETFBKMTQ8IXQ9 262 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 MCOLN2Q8IZK6 566 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SLC2A11Q9BYW1 496 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 ISCUQ9H1K1 167 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 LINC00597Q9H2U6 94 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 DDIT4Q9NX09 232 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SFMBT1Q9UHJ3 866 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SLC12A6Q9UHW9 1150 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 AGO1Q9UL18 857 aaKnown RBP14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SIT1Q9Y3P8 196 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 SCINQ9Y6U3 715 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 KIAA1549LQ6ZVL6 1849 aa14.26□□□□□ -0.13
LIMD1-203ENST00000465039 TCRBV5S1A1TA0A578 114 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 AKR1B15C9JRZ8 316 aaPredicted RBP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 DDX3XO00571 662 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■□□ 19.1
LIMD1-203ENST00000465039 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 ENDOD1O94919 500 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 CYBBP04839 570 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 KRT3P12035 628 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 SDC4P31431 198 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 GRSF1Q12849 480 aaKnown RBP eCLIP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 CCINQ13939 588 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 E2F5Q15329 346 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 LY6G5CQ5SRR4 150 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 TTC39BQ5VTQ0 682 aaPredicted RBP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 PLEKHA7Q6IQ23 1121 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 NUDT18Q6ZVK8 323 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 SND1Q7KZF4 910 aaKnown RBP eCLIP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 DENND1CQ8IV53 801 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 FNIP1Q8TF40 1166 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 CPLX3Q8WVH0 158 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 P2RY13Q9BPV8 354 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 MRPL47Q9HD33 250 aaKnown RBP14.25□□□□□ -0.13
LIMD1-203ENST00000465039 PARVAQ9NVD7 372 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 ARHGAP20Q9P2F6 1191 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 CACNA1HO95180 2353 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 KMT2EQ8IZD2 1858 aa14.25□□□□□ -0.13
LIMD1-203ENST00000465039 A0A0A0MRY4 1105 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms