RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 CXCR3P49682 368 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 TBX4P57082 545 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ARHGAP15Q53QZ3 475 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ZC3H12AQ5D1E8 599 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ZFYVE27Q5T4F4 411 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 CCDC185Q8N715 623 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ITFG1Q8TB96 612 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ING5Q8WYH8 240 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 SMPD4Q9NXE4 827 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 TLR6Q9Y2C9 796 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 PCDHA3Q9Y5H8 950 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 C2orf16Q68DN1 1984 aa13.28□□□□□ -0.28
SUPT20H-204ENST00000464572 DDX3YO15523 660 aaKnown RBP13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 PSTPIP1O43586 416 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 CKMP06732 381 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 ALG3Q92685 438 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 GKN1Q9NS71 199 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 C5orf42Q9H799 3197 aa13.27□□□□□ -0.28
SUPT20H-204ENST00000464572 OLFM2O95897 454 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 KRT7P08729 469 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 RARAP10276 462 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 CEBPBP17676 345 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 CTNNA2P26232 953 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 CCR1P32246 355 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 PEX5P50542 639 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 ITIH3Q06033 890 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 CBX2Q14781 532 aaPredicted RBP13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 COL19A1Q14993 1142 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 LRRC38Q5VT99 294 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 CES5AQ6NT32 575 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 HSPH1Q92598 858 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 GUCD1Q96NT3 240 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 TKTL2Q9H0I9 626 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 ANLNQ9NQW6 1124 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 KLHL11Q9NVR0 708 aa13.27□□□□□ -0.29
SUPT20H-204ENST00000464572 TRAV19A0A0A6YYK7 116 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 CXCR5P32302 372 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 COG7P83436 770 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 NNTQ13423 1086 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 CLUL1Q15846 466 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 BOLA3Q53S33 107 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 SLC39A13Q96H72 371 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 SNRNP25Q9BV90 132 aaKnown RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 BRWD1Q9NSI6 2320 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 I6L893 689 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 KCNK3O14649 394 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 FSHRP23945 695 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 DDX6P26196 483 aaKnown RBP eCLIP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ADRA1BP35368 520 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 KCNQ1P51787 676 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 DNTTIP2Q5QJE6 756 aaKnown RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 PPM1EQ8WY54 764 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 FCRL2Q96LA5 508 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 KLF16Q9BXK1 252 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 HBS1LQ9Y450 684 aaKnown RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 CPQQ9Y646 472 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 MOCS2O96007 188 aaPredicted RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 FOSL2P15408 326 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 AVPR1AP37288 418 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 RWDD2BP57060 319 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ZXDBP98169 803 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ARL13BQ3SXY8 428 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 BRMS1LQ5PSV4 323 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 POTEHQ6S545 545 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 TTC16Q8NEE8 873 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 KIF18AQ8NI77 898 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 ZSWIM3Q96MP5 696 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 SMG9Q9H0W8 520 aaKnown RBP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 FZD10Q9ULW2 581 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 AP4E1Q9UPM8 1137 aa13.26□□□□□ -0.29
SUPT20H-204ENST00000464572 IRF1P10914 325 aa13.25□□□□□ -0.29
SUPT20H-204ENST00000464572 SLC2A3P11169 496 aa13.25□□□□□ -0.29
SUPT20H-204ENST00000464572 PFKLP17858 780 aa13.25□□□□□ -0.29
SUPT20H-204ENST00000464572 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
SUPT20H-204ENST00000464572 CA9Q16790 459 aa13.25□□□□□ -0.29
SUPT20H-204ENST00000464572 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms