RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 UCMAQ8WVF2 138 aa18.16■□□□□ 0.5
HMGN1-210ENST00000464078 PIWIL1Q96J94 861 aaKnown RBP18.16■□□□□ 0.5
HMGN1-210ENST00000464078 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
HMGN1-210ENST00000464078 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
HMGN1-210ENST00000464078 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
HMGN1-210ENST00000464078 KIAA1522Q9P206 1035 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-210ENST00000464078 MUC22E2RYF6 1773 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-210ENST00000464078 CELSR3Q9NYQ7 3312 aa18.16■□□□□ 0.5
HMGN1-210ENST00000464078 SMG1Q96Q15 3661 aaKnown RBP18.16■□□□□ 0.5
HMGN1-210ENST00000464078 HELZ2Q9BYK8 2649 aaKnown RBP18.15■□□□□ 0.5
HMGN1-210ENST00000464078 METTL12A8MUP2 240 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-210ENST00000464078 BCAT2O15382 392 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-210ENST00000464078 CILPO75339 1184 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 DKK1O94907 266 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 RALAP11233 206 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 TMPRSS6Q8IU80 811 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 CPXM2Q8N436 756 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 C1orf216Q8TAB5 229 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 SLC2A11Q9BYW1 496 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 CCDC86Q9H6F5 360 aaKnown RBP18.15■□□□□ 0.5
HMGN1-210ENST00000464078 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
HMGN1-210ENST00000464078 SYNCRIPO60506 623 aaKnown RBP18.14■□□□□ 0.49
HMGN1-210ENST00000464078 SLFN14P0C7P3 912 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 COPAP53621 1224 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 BNC1Q01954 994 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 ENPEPQ07075 957 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 DCAF12L1Q5VU92 463 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 DBX2Q6ZNG2 339 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 SLCO6A1Q86UG4 719 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 FAM217AQ8IXS0 508 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 GRAMD1CQ8IYS0 662 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 PNPLA1Q8N8W4 532 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 PRCCQ92733 491 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-210ENST00000464078 SIPA1Q96FS4 1042 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 DNAI2Q9GZS0 605 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 APOBEC3GQ9HC16 384 aaKnown RBP18.14■□□□□ 0.49
HMGN1-210ENST00000464078 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 ELOVL2Q9NXB9 296 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 DKK4Q9UBT3 224 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 PCDHA7Q9UN72 937 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 FNDC3AQ9Y2H6 1198 aaKnown RBP18.14■□□□□ 0.49
HMGN1-210ENST00000464078 FRMD4BQ9Y2L6 1034 aa18.14■□□□□ 0.49
HMGN1-210ENST00000464078 FLRT2O43155 660 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
HMGN1-210ENST00000464078 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
HMGN1-210ENST00000464078 CORO1AP31146 461 aaKnown RBP18.13■□□□□ 0.49
HMGN1-210ENST00000464078 MATKP42679 507 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 ME1P48163 572 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 ZNF234Q14588 700 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 TAS1R2Q8TE23 839 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 GAREM1Q9H706 876 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 IL21RQ9HBE5 538 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 RASAL2Q9UJF2 1139 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 AGO1Q9UL18 857 aaKnown RBP18.13■□□□□ 0.49
HMGN1-210ENST00000464078 TRAF3IP3Q9Y228 551 aa18.13■□□□□ 0.49
HMGN1-210ENST00000464078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.12■□□□□ 0.49
HMGN1-210ENST00000464078 CYBBP04839 570 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 MYL1P05976 194 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 PRKCHP24723 683 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 VAMP7P51809 220 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 EFEMP1Q12805 493 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 NUMA1Q14980 2115 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 NFIL3Q16649 462 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 INTS8Q75QN2 995 aaKnown RBP18.12■□□□□ 0.49
HMGN1-210ENST00000464078 ARHGAP18Q8N392 663 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 SETD7Q8WTS6 366 aaKnown RBP18.12■□□□□ 0.49
HMGN1-210ENST00000464078 PAGE5Q96GU1 130 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 CDC6Q99741 560 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 MIR1-1HGQ9H1L0 117 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 TOR4AQ9NXH8 423 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 MARCH2Q9P0N8 246 aa18.12■□□□□ 0.49
HMGN1-210ENST00000464078 SETXQ7Z333 2677 aaKnown RBP18.11■□□□□ 0.49
HMGN1-210ENST00000464078 TIMM44O43615 452 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 CD58P19256 250 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 AFF3P51826 1226 aaKnown RBP18.11■□□□□ 0.49
HMGN1-210ENST00000464078 PDE4CQ08493 712 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 CAMK2GQ13555 558 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-210ENST00000464078 HLA-BQ31612 363 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 PPP1R26Q5T8A7 1209 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-210ENST00000464078 SERPINA13PQ6UXR4 307 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 TMPRSS7Q7RTY8 843 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 PDZD3Q86UT5 571 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 DENND1CQ8IV53 801 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 TTC39CQ8N584 583 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 PLD4Q96BZ4 506 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 FAXDC2Q96IV6 333 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 UBXN6Q9BZV1 441 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 OSGEPQ9NPF4 335 aa18.11■□□□□ 0.49
HMGN1-210ENST00000464078 SCUBE2Q9NQ36 999 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms