RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 ZNF324BQ6AW86 544 aaPredicted RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 MORC1Q86VD1 984 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 RFX6Q8HWS3 928 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 SPATA2LQ8IUW3 424 aaPredicted RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 RAVER1Q8IY67 606 aaKnown RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 KIAA0319LQ8IZA0 1049 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 PELI3Q8N2H9 469 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 RUNDC1Q96C34 613 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 SEZ6LQ9BYH1 1024 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 C22orf23Q9BZE7 217 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 TMEM60Q9H2L4 133 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 DNMT3BQ9UBC3 853 aaKnown RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 AFF4Q9UHB7 1163 aaKnown RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 NOB1Q9ULX3 412 aaKnown RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 L1RE1Q9UN81 338 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 MMP24Q9Y5R2 645 aa2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 TTBK1Q5TCY1 1321 aaPredicted RBP2.89□□□□□ -1.95
NDUFA4-202ENST00000463308 TMEM272A0A1B0GTI8 110 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 TRIM43BA6NCK2 446 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 CAPN8A6NHC0 703 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 ISM1B1AKI9 464 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 RAB27BO00194 218 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 CGAP01215 116 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 PARP1P09874 1014 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 TMIGD3P0DMS9 266 aaPredicted RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 HGFP14210 728 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 ATF7P17544 494 aaPredicted RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 MATN1P21941 496 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 POLD2P49005 469 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 VPS41P49754 854 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 P2RX3P56373 397 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 GPC5P78333 572 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 CNN3Q15417 329 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 C3orf38Q5JPI3 329 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 OTUD3Q5T2D3 398 aaPredicted RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 APOA5Q6Q788 366 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 RBM44Q6ZP01 1051 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 NR2C2APQ86WQ0 139 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 FAM177A1Q8N128 213 aaPredicted RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 SDR16C5Q8N3Y7 309 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 B4GALNT2Q8NHY0 566 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 TRIM43Q96BQ3 446 aaPredicted RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 NMD3Q96D46 503 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 TM6SF1Q9BZW5 370 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 ERVK-5Q9HDB9 667 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 PLK2Q9NYY3 685 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 ITGB1BP2Q9UKP3 347 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 AGO2Q9UKV8 859 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 OGDHLQ9ULD0 1010 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 TPCN1Q9ULQ1 816 aa2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 THRAP3Q9Y2W1 955 aaKnown RBP2.88□□□□□ -1.95
NDUFA4-202ENST00000463308 RPS10-NUDT3A0A1W2PQS6 291 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 DENND3A2RUS2 1198 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 FAM227AF5H4B4 570 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 AGPSO00116 658 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 TLX3O43711 291 aaPredicted RBP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 UGDHO60701 494 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 KRTAP10-3P60369 221 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 FMO1Q01740 532 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 GAD2Q05329 585 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 SF3B4Q15427 424 aaKnown RBP eCLIP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 CNGA2Q16280 664 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 MINDY4Q4G0A6 757 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 ARHGAP29Q52LW3 1261 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 ISM2Q6H9L7 571 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 NADSYN1Q6IA69 706 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 CXorf57Q6NSI4 855 aaKnown RBP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 LRIG3Q6UXM1 1119 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 CLEC9AQ6UXN8 241 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 C11orf44Q8N8P7 122 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 FAM47BQ8NA70 645 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 ELP5Q8TE02 316 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 NUDCD2Q8WVJ2 157 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 WDYHV1Q96HA8 205 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 EIF3CQ99613 913 aaKnown RBP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 TTLL2Q9BWV7 592 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 MYLK2Q9H1R3 596 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 CHST8Q9H2A9 424 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 C6orf106Q9H6K1 298 aaPredicted RBP2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 FAM204AQ9H8W3 233 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 CD93Q9NPY3 652 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 GJB4Q9NTQ9 266 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 MSRB1Q9NZV6 116 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 ASAP1Q9ULH1 1129 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 RIMKLBQ9ULI2 386 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 MYO6Q9UM54 1294 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 PCDHA7Q9UN72 937 aa2.87□□□□□ -1.95
NDUFA4-202ENST00000463308 SLC22A23A1A5C7 686 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 A6NNZ2 444 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 H0YGN5 161 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 TNFRSF13BO14836 293 aaPredicted RBP2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 CAMTA2O94983 1202 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 EPN2O95208 641 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 AKR1A1P14550 325 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 BTF3P20290 206 aaKnown RBP2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 MMP8P22894 467 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 YY1P25490 414 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 DUSP1P28562 367 aa2.86□□□□□ -1.95
NDUFA4-202ENST00000463308 CIITAP33076 1130 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms