RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ARHGEF26Q96DR7 871 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 SLC39A13Q96H72 371 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-221ENST00000462352 TBCBQ99426 244 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 DCLK3Q9C098 648 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 DDIT4Q9NX09 232 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
CPNE1-221ENST00000462352 COX16Q9P0S2 106 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 CALCOCO1Q9P1Z2 691 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 TBC1D14Q9P2M4 693 aa12.28□□□□□ -0.44
CPNE1-221ENST00000462352 KIF26AQ9ULI4 1882 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-221ENST00000462352 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 SLC9A3R1O14745 358 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 NDUFA10O95299 355 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 LCA5LO95447 670 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 CYP1A2P05177 515 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 TMEM253P0C7T8 217 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 PTPN9P43378 593 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 HARS2P49590 506 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 ATP11AP98196 1134 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 DEUP1Q05D60 604 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 NME3Q13232 169 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 PDGFRLQ15198 375 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 C15orf59Q2T9L4 293 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 EML3Q32P44 896 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 NUGGCQ68CJ6 796 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 H2AFVQ71UI9 128 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 BNIPLQ7Z465 357 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 DENND1CQ8IV53 801 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 UNC45BQ8IWX7 931 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 UBALD2Q8IYN6 164 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 CTNNBL1Q8WYA6 563 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 OTUB2Q96DC9 234 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 PGAP3Q96FM1 320 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 MRPL47Q9HD33 250 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 HPS4Q9NQG7 708 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 PIGVQ9NUD9 493 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 AGO1Q9UL18 857 aaKnown RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 ZNF510Q9Y2H8 683 aa12.27□□□□□ -0.45
CPNE1-221ENST00000462352 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-221ENST00000462352 A0A0C4DFX4 3053 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 TMEM191CA6NGB0 347 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CCP110O43303 1012 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ENDOD1O94919 500 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 F9P00740 461 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 APOEP02649 317 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ARSAP15289 507 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CCR1P32246 355 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 MAGEA1P43355 309 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ZNF143P52747 638 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ATXN1P54253 815 aaKnown RBP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ZXDAP98168 799 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 PFKPQ01813 784 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 OGDHQ02218 1023 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 TNK2Q07912 1038 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 RUNX3Q13761 415 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 SPA17Q15506 151 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CDO1Q16878 200 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 C10orf76Q5T2E6 689 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 SH3PXD2AQ5TCZ1 1133 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ADGRG2Q8IZP9 1017 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CSGALNACT1Q8TDX6 532 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CENPIQ92674 756 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 ATP2A3Q93084 1043 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 RNF34Q969K3 372 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 CNPY3Q9BT09 278 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 NUP85Q9BW27 656 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 COL25A1Q9BXS0 654 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 TRPV5Q9NQA5 729 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPNE1-221ENST00000462352 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
CPNE1-221ENST00000462352 KCNU1A8MYU2 1149 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 DCXO43602 365 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 ACSL4O60488 711 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 NFATC1O95644 943 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 LATS1O95835 1130 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 MOCS2O96007 188 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-221ENST00000462352 CYP17A1P05093 508 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 SLC2A3P11169 496 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 PSMA2P25787 234 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 CXCR3P49682 368 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 ZNF252P-AS1Q0IIN9 211 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 PPP2R5DQ14738 602 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 IER5LQ5T953 404 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 SND1Q7KZF4 910 aaKnown RBP eCLIP12.25□□□□□ -0.45
CPNE1-221ENST00000462352 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 LRRC8AQ8IWT6 810 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 CPA6Q8N4T0 437 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 ATP6V0D2Q8N8Y2 350 aa12.25□□□□□ -0.45
CPNE1-221ENST00000462352 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms