RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SPTBN2O15020 2390 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 MYOFQ9NZM1 2061 aa9.59□□□□□ -0.87
BRCA1-207ENST00000461798 DNAH14Q0VDD8 3507 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 SPAG17Q6Q759 2223 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 TCRBV21S2A2A0A5A6 115 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 SLC12A8A0AV02 714 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 YJEFN3A6XGL0 299 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 E7ENQ6 273 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 LATS1O95835 1130 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 ADRB1P08588 477 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 HOXB2P14652 356 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 GABRG2P18507 467 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 CORO1AP31146 461 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 DPP6P42658 865 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 RPL34P49207 117 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 MFAP3P55082 362 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 DAOAP59103 153 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 CREB5Q02930 508 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 ADIGQ0VDE8 80 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 PAK1Q13153 545 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 ENPP2Q13822 863 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 E2F5Q15329 346 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 CCDC6Q16204 474 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 STPG1Q5TH74 334 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 PMF1Q6P1K2 205 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 RSRC2Q7L4I2 434 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 LPCAT2Q7L5N7 544 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 DENND1CQ8IV53 801 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 CHPFQ8IZ52 775 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 HMGB4Q8WW32 186 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 IRGQQ8WZA9 623 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 NDRG1Q92597 394 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 KAT5Q92993 513 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 PIWIL1Q96J94 861 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 SPACA7Q96KW9 195 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 HSFY1Q96LI6 401 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 ACOX2Q99424 681 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 SRRTQ9BXP5 876 aaKnown RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 ZDHHC4Q9NPG8 344 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 EVLQ9UI08 416 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 MBD1Q9UIS9 605 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.58□□□□□ -0.88
BRCA1-207ENST00000461798 PCDHB4Q9Y5E5 795 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 KIAA1549LQ6ZVL6 1849 aa9.58□□□□□ -0.88
BRCA1-207ENST00000461798 MYO16Q9Y6X6 1858 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 BIN1O00499 593 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 KHNYNO15037 678 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 TIMM44O43615 452 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF217O75362 1048 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 FGFR1OPO95684 399 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 CYBBP04839 570 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 HOXD12P35452 270 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 HARS2P49590 506 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 STX17P56962 302 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 ZNF445P59923 1031 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 UBE2HP62256 183 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 EIF4HQ15056 248 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 MEA1Q16626 185 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 MPPE1Q53F39 396 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 PEAR1Q5VY43 1037 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 IL31Q6EBC2 164 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 MSANTD2Q6P1R3 559 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 SLC36A4Q6YBV0 504 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 FMNL3Q8IVF7 1028 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 ABCA7Q8IZY2 2146 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 SIX6OS1Q8N1H7 587 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 PPM1KQ8N3J5 372 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 FRMD1Q8N878 549 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 RBBP8NLQ8NC74 664 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 IPO4Q8TEX9 1081 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 RNF139Q8WU17 664 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 RLN3Q8WXF3 142 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 AZIN2Q96A70 460 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 KREMEN1Q96MU8 473 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 IPO9Q96P70 1041 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 LSM14BQ9BX40 385 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 SMOC1Q9H4F8 434 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 PLK2Q9NYY3 685 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 KIAA1468Q9P260 1216 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 BCCIPQ9P287 314 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 THAP10Q9P2Z0 257 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 RWDD2AQ9UIY3 292 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 EML5Q05BV3 1969 aa9.57□□□□□ -0.88
BRCA1-207ENST00000461798 CNOT1A5YKK6 2376 aaKnown RBP9.57□□□□□ -0.88
BRCA1-207ENST00000461798 MYO18AQ92614 2054 aaKnown RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 RIOK3O14730 519 aaKnown RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 ZBTB24O43167 697 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-207ENST00000461798 FBXO21O94952 628 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 IGLV3-27P01718 113 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 HMBSP08397 361 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 WASP42768 502 aa9.56□□□□□ -0.88
BRCA1-207ENST00000461798 PTGER3P43115 390 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms