RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PIK3AP1Q6ZUJ8 805 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 BBS12Q6ZW61 710 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 PARS2Q7L3T8 475 aaKnown RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 SFTPA1Q8IWL2 248 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 LCORLQ8N3X6 602 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 ABHD11Q8NFV4 315 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 ASB10Q8WXI3 467 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D5Q92609 795 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 R3HDM4Q96D70 268 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 HAPLN3Q96S86 360 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 PRRX2Q99811 253 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 AIFM2Q9BRQ8 373 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 JMJD4Q9H9V9 463 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 AS3MTQ9HBK9 375 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 RIC8AQ9NPQ8 531 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 ARHGEF3Q9NR81 526 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 LRIT1Q9P2V4 623 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 AMFRQ9UKV5 643 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 SUFUQ9UMX1 484 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 CRYL1Q9Y2S2 319 aa3.44□□□□□ -1.86
HDAC6-212ENST00000461608 RRP7AQ9Y3A4 280 aaKnown RBP3.44□□□□□ -1.86
HDAC6-212ENST00000461608 LOC105369274A0A096LPK9 316 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 LOC102723532A0A0G2JNH3 316 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 E7EVH7 732 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 J3KRW8 73 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 NKX2-8O15522 239 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 AGR2O95994 175 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 ALDOAP04075 364 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 RHOP08100 348 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CHRM2P08172 466 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CNPP09543 421 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CREB1P16220 341 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 NDUFB7P17568 137 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 KRT9P35527 623 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 IGHMBP2P38935 993 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PBX1P40424 430 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PCP4P48539 62 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 HNRNPMP52272 730 aaKnown RBP eCLIP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 RBM6P78332 1123 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CHRNDQ07001 517 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CCDC15Q0P6D6 951 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 DNASE1L3Q13609 305 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CUL4BQ13620 913 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 FHL3Q13643 280 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 FAM187BQ17R55 369 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 LY6KQ17RY6 165 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 AARS2Q5JTZ9 985 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 LRCH2Q5VUJ6 765 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 KAZNQ674X7 775 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 WDR93Q6P2C0 686 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 TMEM88Q6PEY1 159 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 DSTYKQ6XUX3 929 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 Q6ZWC4 215 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 RSRC2Q7L4I2 434 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 BHLHA9Q7RTU4 235 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PCGF5Q86SE9 256 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 MRGPREQ86SM8 312 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 OR4N4Q8N0Y3 316 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PTGR2Q8N8N7 351 aaPredicted RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 C11orf44Q8N8P7 122 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 FSIP1Q8NA03 581 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 ADPRHL1Q8NDY3 354 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 SIMC1Q8NDZ2 872 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 OR52L2PQ8NGH6 319 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 OR1N1Q8NGS0 311 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CEP70Q8NHQ1 597 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 NOC3LQ8WTT2 800 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 SLC22A17Q8WUG5 538 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 RFKQ969G6 155 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 SKA1Q96BD8 255 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 WDYHV1Q96HA8 205 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 Q96MF0 132 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PRR25Q96S07 402 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 PIGSQ96S52 555 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 FSD1LQ9BXM9 530 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CCDC134Q9H6E4 229 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CYP4F11Q9HBI6 524 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 UBN1Q9NPG3 1134 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 DUSP22Q9NRW4 184 aa3.43□□□□□ -1.86
HDAC6-212ENST00000461608 CCNL1Q9UK58 526 aaPredicted RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 REXO2Q9Y3B8 237 aaKnown RBP3.43□□□□□ -1.86
HDAC6-212ENST00000461608 TMEM191CA6NGB0 347 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 B9A039 149 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 QSOX1O00391 747 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CES2O00748 559 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SPRY2O43597 315 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CER1O95813 267 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ERBB2P04626 1255 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SLC3A2P08195 630 aaKnown RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CKMT1AP12532 417 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 DUSP1P28562 367 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CTGFP29279 349 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 GRK5P34947 590 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 THBS4P35443 961 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 PSMC2P35998 433 aaKnown RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ARL1P40616 181 aaPredicted RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 GRIA3P42263 894 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 RBM5P52756 815 aaKnown RBP eCLIP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms