RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 YWHAGP61981 247 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMPD4-216ENST00000461187 GFPT1Q06210 699 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-216ENST00000461187 ENPP2Q13822 863 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 FUT11Q495W5 492 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 PM20D1Q6GTS8 502 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 KIAA1324Q6UXG2 1013 aaKnown RBP15.41■□□□□ 0.06
SMPD4-216ENST00000461187 DENND1CQ8IV53 801 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 ARHGAP18Q8N392 663 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
SMPD4-216ENST00000461187 SCNM1Q9BWG6 230 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 GTPBP2Q9BX10 602 aaKnown RBP15.41■□□□□ 0.06
SMPD4-216ENST00000461187 SLC32A1Q9H598 525 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 MARCH2Q9P0N8 246 aa15.41■□□□□ 0.06
SMPD4-216ENST00000461187 DOCK9Q9BZ29 2069 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 TULP2O00295 520 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 ARHGAP33O14559 1287 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 NPC1O15118 1278 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 STX10O60499 249 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 NDUFS2O75306 463 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 IL12RB1P42701 662 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 PRCPP42785 496 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 TKTL1P51854 596 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 ATXN3P54252 364 aaPredicted RBP15.4■□□□□ 0.06
SMPD4-216ENST00000461187 PNOCQ13519 176 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 CBWD6Q4V339 395 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 CBWD3Q5JTY5 395 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 CBWD5Q5RIA9 395 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 RSRC2Q7L4I2 434 aaKnown RBP15.4■□□□□ 0.06
SMPD4-216ENST00000461187 BHLHA9Q7RTU4 235 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 METTL3Q86U44 580 aaKnown RBP15.4■□□□□ 0.06
SMPD4-216ENST00000461187 FAM217AQ8IXS0 508 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 CPXM2Q8N436 756 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 HDDC3Q8N4P3 179 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 MINDY1Q8N5J2 469 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 OR2I1PQ8NGU4 316 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 NDRG1Q92597 394 aaKnown RBP15.4■□□□□ 0.06
SMPD4-216ENST00000461187 ADAM33Q9BZ11 813 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 PRDM16Q9HAZ2 1276 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 GDPD2Q9HCC8 539 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 USP36Q9P275 1121 aaKnown RBP15.4■□□□□ 0.06
SMPD4-216ENST00000461187 STRIP2Q9ULQ0 834 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 CLEC4EQ9ULY5 219 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 COQ4Q9Y3A0 265 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 PLXNA2O75051 1894 aa15.4■□□□□ 0.06
SMPD4-216ENST00000461187 SPAARA0A1B0GVQ0 90 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 SLC12A8A0AV02 714 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 XPO1O14980 1071 aaKnown RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 OPHN1O60890 802 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ZBED1O96006 694 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ZNF132P52740 706 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 PDE4CQ08493 712 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 STARD3Q14849 445 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 GOLGA7BQ2TAP0 167 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ANKS1BQ7Z6G8 1248 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 RGL4Q8IZJ4 473 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 KDF1Q8NAX2 398 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 RBBP8NLQ8NC74 664 aaPredicted RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 UCMAQ8WVF2 138 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 GATA6Q92908 595 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ULBP1Q9BZM6 244 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 MKRN2Q9H000 416 aaKnown RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ITM2CQ9NQX7 267 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 DNAAF2Q9NVR5 837 aaKnown RBP15.39■□□□□ 0.05
SMPD4-216ENST00000461187 ELOVL2Q9NXB9 296 aa15.39■□□□□ 0.05
SMPD4-216ENST00000461187 KCNJ18B7U540 433 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 CYBBP04839 570 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 SYPP08247 313 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 CD59P13987 128 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 MAOBP27338 520 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 CD6P30203 668 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 SLC8A3P57103 927 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 CUL2Q13617 745 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 ZNF234Q14588 700 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 TRIP4Q15650 581 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-216ENST00000461187 PLEKHG6Q3KR16 790 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-216ENST00000461187 SYCP2LQ5T4T6 812 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 TMEM215Q68D42 235 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-216ENST00000461187 FOXJ1Q92949 421 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 PLD4Q96BZ4 506 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 TOE1Q96GM8 510 aaKnown RBP15.38■□□□□ 0.05
SMPD4-216ENST00000461187 SLC2A11Q9BYW1 496 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 WSB2Q9NYS7 404 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-216ENST00000461187 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 ZMIZ1Q9ULJ6 1067 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 PKD1L2Q7Z442 2459 aa15.38■□□□□ 0.05
SMPD4-216ENST00000461187 SLC16A3O15427 465 aaKnown RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 HYAL3O43820 417 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 GJB3O75712 270 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 PRKCHP24723 683 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 PMS1P54277 932 aaKnown RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 BCAT1P54687 386 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 FAM193AP78312 1265 aa15.37■□□□□ 0.05
SMPD4-216ENST00000461187 SIM1P81133 766 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-216ENST00000461187 BST2Q10589 180 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms