RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 DUSP28Q4G0W2 176 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 ARHGAP18Q8N392 663 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 CKAP2Q8WWK9 683 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 RNF157Q96PX1 679 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TRIM56Q9BRZ2 755 aaKnown RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TBC1D10AQ9BXI6 508 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 FOXP3Q9BZS1 431 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 UBQLN1Q9UMX0 589 aaKnown RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 COL11A1P12107 1806 aaPredicted RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 ATP5HO75947 161 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 SLC25A11Q02978 314 aaKnown RBP15.93■□□□□ 0.14
LMNB1-203ENST00000460265 GBE1Q04446 702 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 POLNQ7Z5Q5 900 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 TTC30AQ86WT1 665 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 PYROXD2Q8N2H3 581 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 MYLK2Q9H1R3 596 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 PDP2Q9P2J9 529 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 SSC5DA1L4H1 1573 aa15.93■□□□□ 0.14
LMNB1-203ENST00000460265 RRN3P2A6NIE6 340 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 NDC80O14777 642 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ALOX15BO15296 676 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 TAF6P49848 677 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 OASLQ15646 514 aaKnown RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KDELC2Q7Z4H8 507 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 NPLOC4Q8TAT6 608 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 SLC7A14Q8TBB6 771 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 NKD2Q969F2 451 aaPredicted RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CFAP69A5D8W1 941 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 HNRNPRO43390 633 aaKnown RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ENPEPQ07075 957 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 FAAP100Q0VG06 881 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 SFSWAPQ12872 951 aaKnown RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KYAT1Q16773 422 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 PARP6Q2NL67 630 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 RWDD4Q6NW29 188 aaKnown RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KCNT2Q6UVM3 1135 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CES3Q6UWW8 571 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 TRABD2AQ86V40 505 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 DEFB106AQ8N104 65 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF333Q96JL9 665 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 RRAGCQ9HB90 399 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KLHL8Q9P2G9 620 aaPredicted RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CASTOR2A6NHX0 329 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KCNK1O00180 336 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CYB561D2O14569 222 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 PAPSS1O43252 624 aaPredicted RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF189O75820 626 aaPredicted RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CCNB1P14635 433 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 SKIV2L2P42285 1042 aaKnown RBP15.92■□□□□ 0.14
LMNB1-203ENST00000460265 TMPRSS15P98073 1019 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 MFSD10Q14728 455 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 RCN1Q15293 331 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CCL14Q16627 93 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 DCAF4L1Q3SXM0 396 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 CCDC14Q49A88 953 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 LCLAT1Q6UWP7 414 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ECHDC2Q86YB7 292 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 ADGRF2Q8IZF7 708 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 SLC35B2Q8TB61 432 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 LPPQ93052 612 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 MAGEB18Q96M61 343 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 FAM192AQ9GZU8 254 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 PAK5Q9P286 719 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 DNAH12Q6ZR08 3092 aa15.92■□□□□ 0.14
LMNB1-203ENST00000460265 KRT37O76014 449 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 LMNAP02545 664 aaKnown RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 HNRNPCP07910 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 FOXN2P32314 431 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 MAP7Q14244 749 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 CNPY1Q3B7I2 92 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 SH2D4BQ5SQS7 431 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 EDEM1Q92611 657 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 STMN2Q93045 179 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 TNIP3Q96KP6 325 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 TMEM109Q9BVC6 243 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 BCO2Q9BYV7 579 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 DENND2DQ9H6A0 471 aaPredicted RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 TMCO1Q9UM00 188 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 ATAD5Q96QE3 1844 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 SMIM28A0A1B0GU29 152 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 OAS1P00973 400 aaKnown RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 SRGAP2BP0DMP2 458 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 PROZP22891 400 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 CCNFP41002 786 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 WDR4P57081 412 aaKnown RBP15.91■□□□□ 0.14
LMNB1-203ENST00000460265 MDH1BQ5I0G3 518 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 WSCD1Q658N2 575 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 PTPRN2Q92932 1015 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF560Q96MR9 790 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 LGMNQ99538 433 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 APOL2Q9BQE5 337 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 TMPRSS4Q9NRS4 437 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.91■□□□□ 0.148e-15■■□□□ 13.2
LMNB1-203ENST00000460265 KIAA1257Q9ULG3 409 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 C2CD4BA6NLJ0 364 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 TP73O15350 636 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 USP12O75317 370 aa15.91■□□□□ 0.14
LMNB1-203ENST00000460265 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms