RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 WDR35Q9P2L0 1181 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 WNT16Q9UBV4 365 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 AGO1Q9UL18 857 aaKnown RBP13.36□□□□□ -0.27
COL18A1-206ENST00000459895 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 TLR6Q9Y2C9 796 aa13.36□□□□□ -0.27
COL18A1-206ENST00000459895 SSU72P8A0A1W2PR75 194 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 DLL1O00548 723 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 SLC9A3R1O14745 358 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 RTN2O75298 545 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 MOCS2O96007 188 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 GZMAP12544 262 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ABCB4P21439 1286 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 NOS2P35228 1153 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 CDK17Q00537 523 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 RING1Q06587 406 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 NME3Q13232 169 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 EIF4EBP2Q13542 120 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ASTE1Q2TB18 679 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 NUGGCQ68CJ6 796 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 NADSYN1Q6IA69 706 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 BNIPLQ7Z465 357 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 C12orf40Q86WS4 652 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 FAM217AQ8IXS0 508 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 DEF6Q9H4E7 631 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 ECT2Q9H8V3 914 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 TBC1D14Q9P2M4 693 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
COL18A1-206ENST00000459895 MYOFQ9NZM1 2061 aa13.35□□□□□ -0.27
COL18A1-206ENST00000459895 M0QYT0 321 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 CCP110O43303 1012 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ADH1CP00326 375 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 FTLP02792 175 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ADH5P11766 374 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 CD72P21854 359 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 FECHP22830 423 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 GJA4P35212 333 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 RFC1P35251 1148 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 SGSHP51688 502 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 KPNA1P52294 538 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 RPL7AP62424 266 aaKnown RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 OGDHQ02218 1023 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 DHCR24Q15392 516 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 SLC18A3Q16572 532 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 CDO1Q16878 200 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 FAM133BQ5BKY9 247 aaKnown RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 LY6G5CQ5SRR4 150 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ARCQ7LC44 396 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 RXFP2Q8WXD0 754 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 BHMTQ93088 406 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 OTUB2Q96DC9 234 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ARHGEF26Q96DR7 871 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 DDX23Q9BUQ8 820 aaKnown RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 PACSIN1Q9BY11 444 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 DCLK3Q9C098 648 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 THAP2Q9H0W7 228 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
COL18A1-206ENST00000459895 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
COL18A1-206ENST00000459895 GOLGA6L3A6NEY3 463 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 I6L893 689 aaPredicted RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 LATS1O95835 1130 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 APOEP02649 317 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 KRT3P12035 628 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 GPD1P21695 349 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 TARSP26639 723 aaKnown RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SDC4P31431 198 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SLC6A4P31645 630 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 GGCXP38435 758 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 PTPN9P43378 593 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 HARS2P49590 506 aaKnown RBP13.33□□□□□ -0.28
COL18A1-206ENST00000459895 ATP11AP98196 1134 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 PRKCQQ04759 706 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 KDSRQ06136 332 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 MAMLD1Q13495 774 aa13.33□□□□□ -0.28
COL18A1-206ENST00000459895 SLC25A52Q3SY17 297 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms