RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 YME1L1Q96TA2 773 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 LRRC1Q9BTT6 524 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 HERC2P3Q9BVR0 1158 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 MAK16Q9BXY0 300 aaKnown RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 DDX47Q9H0S4 455 aaKnown RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 LRRC19Q9H756 370 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 FAM114A2Q9NRY5 505 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
VPS50-207ENST00000458530 PCYOX1Q9UHG3 505 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 SSX2IPQ9Y2D8 614 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 BACE2Q9Y5Z0 518 aa9.31□□□□□ -0.92
VPS50-207ENST00000458530 ZNF292O60281 2723 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 HHLA1C9JL84 531 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 F8W810 466 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 RAD51CO43502 376 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 ATP8B1O43520 1251 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 BEST1O76090 585 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 ECEL1O95672 775 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 SOD2P04179 222 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 URODP06132 367 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 ZFXP17010 805 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 KDELR1P24390 212 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 IGFBP6P24592 240 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 BMPR1AP36894 532 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CDKN2BP42772 138 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 GLUD2P49448 558 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CDH6P55285 790 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 GPR17Q13304 367 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PSMD5Q16401 504 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CCNG2Q16589 344 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 C15orf59Q2T9L4 293 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 DCAF6Q58WW2 860 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 ERMARDQ5T6L9 678 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PM20D1Q6GTS8 502 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 SCYL2Q6P3W7 929 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 DRICH1Q6PGQ1 229 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 CCDC137Q6PK04 289 aaKnown RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 ADAT2Q7Z6V5 191 aaKnown RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 CPNE8Q86YQ8 564 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 SCN4BQ8IWT1 228 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 GPR65Q8IYL9 337 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 DEFB106AQ8N104 65 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 COLGALT1Q8NBJ5 622 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 SMRP1Q8NCR6 262 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 ZMIZ2Q8NF64 920 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CMASQ8NFW8 434 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 CLEC4CQ8WTT0 213 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PIK3R5Q8WYR1 880 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 HSPH1Q92598 858 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 SLCO2A1Q92959 643 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PBXIP1Q96AQ6 731 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PIWIL1Q96J94 861 aaKnown RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CALN1Q9BXU9 219 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 GPR62Q9BZJ7 368 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 CWH43Q9H720 699 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS50-207ENST00000458530 SPG21Q9NZD8 308 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
VPS50-207ENST00000458530 HSFX1Q9UBD0 423 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 MTRRQ9UBK8 725 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 MAFFQ9ULX9 164 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 PCDHB12Q9Y5F1 795 aa9.3□□□□□ -0.92
VPS50-207ENST00000458530 GRM6O15303 877 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 ENDOD1O94919 500 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 RARAP10276 462 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 NCAM1P13591 858 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 COILP38432 576 aaPredicted RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 ARL4AP40617 200 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 TUFMP49411 452 aaKnown RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 SLC5A3P53794 718 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 VSNL1P62760 191 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 GUCY2DQ02846 1103 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 KRT17Q04695 432 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 DEUP1Q05D60 604 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 MTA1Q13330 715 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 KLF1Q13351 362 aaPredicted RBP9.29□□□□□ -0.92
VPS50-207ENST00000458530 NNTQ13423 1086 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 PPP1R7Q15435 360 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 TAF5Q15542 800 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 TAZQ16635 292 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 CCDC142Q17RM4 750 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 SMTNL2Q2TAL5 461 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 DAB2IPQ5VWQ8 1189 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 BTBD8Q5XKL5 378 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 SLC8B1Q6J4K2 584 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 TRNP1Q6NT89 227 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 AADACL2Q6P093 401 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 EMBQ6PCB8 327 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 MFSD7Q6UXD7 560 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 BBS12Q6ZW61 710 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 LRRTM3Q86VH5 581 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 RFX6Q8HWS3 928 aa9.29□□□□□ -0.92
VPS50-207ENST00000458530 NUP93Q8N1F7 819 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms