RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RSRC2Q7L4I2 434 aaKnown RBP22.58■■□□□ 1.21
CPNE1-220ENST00000458038 CPXM2Q8N436 756 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 CADM4Q8NFZ8 388 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 TMEM176AQ96HP8 235 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 ITM2CQ9NQX7 267 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 MARCH2Q9P0N8 246 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 USP36Q9P275 1121 aaKnown RBP22.58■■□□□ 1.21
CPNE1-220ENST00000458038 RASAL2Q9UJF2 1139 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 RAD54BQ9Y620 910 aa22.58■■□□□ 1.21
CPNE1-220ENST00000458038 WASH3PC4AMC7 463 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 SYNCRIPO60506 623 aaKnown RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 TOP3BO95985 862 aaKnown RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 EFEMP1Q12805 493 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 FUT11Q495W5 492 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ZNF394Q53GI3 561 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 RAB41Q5JT25 222 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ARHGAP17Q68EM7 881 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ANKS1BQ7Z6G8 1248 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ANKRD52Q8NB46 1076 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 DNASE2BQ8WZ79 361 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 SCAND2PQ9GZW5 306 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 MMRN2Q9H8L6 949 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 CISHQ9NSE2 258 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 OLA1Q9NTK5 396 aaKnown RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 RAB20Q9NX57 234 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 WSB2Q9NYS7 404 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 MAPK8IP1Q9UQF2 711 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ATP6V1DQ9Y5K8 247 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 PKD1L2Q7Z442 2459 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 ANKRD11Q6UB99 2663 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-220ENST00000458038 KNL1Q8NG31 2342 aa22.57■■□□□ 1.2
CPNE1-220ENST00000458038 SPAARA0A1B0GVQ0 90 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 CD59P13987 128 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 MXI1P50539 228 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 ZCWPW2Q504Y3 356 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 KRBA2Q6ZNG9 492 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 SLC4A11Q8NBS3 891 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 PLD4Q96BZ4 506 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 PIWIL1Q96J94 861 aaKnown RBP22.56■■□□□ 1.2
CPNE1-220ENST00000458038 ELOVL2Q9NXB9 296 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 AGO1Q9UL18 857 aaKnown RBP22.56■■□□□ 1.2
CPNE1-220ENST00000458038 DSPP15924 2871 aaKnown RBP22.56■■□□□ 1.2
CPNE1-220ENST00000458038 CKAP5Q14008 2032 aa22.56■■□□□ 1.2
CPNE1-220ENST00000458038 ZFYVE26Q68DK2 2539 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 A0A1B0GTW7 788 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 A0A1W2PQ27 194 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 A0A1W2PQ64 194 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 FAM221BA6H8Z2 402 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 CETN3O15182 167 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 HYAL3O43820 417 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-220ENST00000458038 PRR29P0C7W0 189 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 EPB41P11171 864 aaKnown RBP22.55■■□□□ 1.2
CPNE1-220ENST00000458038 RAD23BP54727 409 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 ZNF445P59923 1031 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 YWHAGP61981 247 aaKnown RBP eCLIP22.55■■□□□ 1.2
CPNE1-220ENST00000458038 GEN1Q17RS7 908 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 PM20D1Q6GTS8 502 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 PIGZQ86VD9 579 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 DENND1CQ8IV53 801 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 FAM217AQ8IXS0 508 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 TOE1Q96GM8 510 aaKnown RBP22.55■■□□□ 1.2
CPNE1-220ENST00000458038 SLC6A17Q9H1V8 727 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 FSCN3Q9NQT6 498 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 PCDHB9Q9Y5E1 797 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 SPEGQ15772 3267 aa22.55■■□□□ 1.2
CPNE1-220ENST00000458038 GJB3O75712 270 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 ZBED1O96006 694 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 HMBSP08397 361 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 PDE4CQ08493 712 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 TMPRSS6Q8IU80 811 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 SPRYD3Q8NCJ5 442 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 DDI1Q8WTU0 396 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 PRCCQ92733 491 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-220ENST00000458038 SEMA4DQ92854 862 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 SIPA1Q96FS4 1042 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 NUP58Q9BVL2 599 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 MKRN2Q9H000 416 aaKnown RBP22.54■■□□□ 1.2
CPNE1-220ENST00000458038 PCED1AQ9H1Q7 454 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 CABIN1Q9Y6J0 2220 aa22.54■■□□□ 1.2
CPNE1-220ENST00000458038 SLC12A8A0AV02 714 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 MEI4A8MW99 385 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 IGLV3-19P01714 112 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 ACADMP11310 421 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 IL12RB1P42701 662 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 HARS2P49590 506 aaKnown RBP22.53■■□□□ 1.2
CPNE1-220ENST00000458038 TPMTP51580 245 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 TKTL1P51854 596 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 YWHAEP62258 255 aaKnown RBP22.53■■□□□ 1.2
CPNE1-220ENST00000458038 ARID5AQ03989 594 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 ZNF234Q14588 700 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 ERLEC1Q96DZ1 483 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 HESX1Q9UBX0 185 aa22.53■■□□□ 1.2
CPNE1-220ENST00000458038 HBS1LQ9Y450 684 aaKnown RBP22.53■■□□□ 1.2
CPNE1-220ENST00000458038 ATRXP46100 2492 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 ZNF202O95125 648 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 NCAM1P13591 858 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 BCAT1P54687 386 aa22.52■■□□□ 1.2
CPNE1-220ENST00000458038 TRIP4Q15650 581 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-220ENST00000458038 TRIP6Q15654 476 aaKnown RBP22.52■■□□□ 1.2
CPNE1-220ENST00000458038 MPPE1Q53F39 396 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms