RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 TTC25Q96NG3 672 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC28BQ9BUN5 200 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SDCBP2Q9H190 292 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 MANSC1Q9H8J5 431 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 VTA1Q9NP79 307 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PTTG2Q9NZH5 202 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SLC7A8Q9UHI5 535 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ZNFX1Q9P2E3 1918 aaKnown RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 FAM237BA0A1B0GVD1 139 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SGK1O00141 431 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PIGRP01833 764 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PEX2P28328 305 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 RFC1P35251 1148 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ARL4CP56559 192 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 EFTUD2Q15029 972 aaKnown RBP eCLIP14.04□□□□□ -0.161e-7■■■■■ 52.3
TOP3B-213ENST00000457179 PDK3Q15120 406 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CXCL17Q6UXB2 119 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ACOT1Q86TX2 421 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM35BQ8NCS4 154 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 GSTCDQ8NEC7 633 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TCP10LQ8TDR4 215 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SLC26A7Q8TE54 656 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TTC17Q96AE7 1141 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 FAM81BQ96LP2 452 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ARHGAP39Q9C0H5 1083 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PARVAQ9NVD7 372 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SYNJ2BP-COX16A0A087WUM0 186 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 MYOCOSA0A1B0GUC4 107 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 SMIM31A0A1B0GVY4 71 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 VILLO15195 856 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 GAD2Q05329 585 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ZNF252P-AS1Q0IIN9 211 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC142Q17RM4 750 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 FAM110CQ1W6H9 321 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 GRAMD1BQ3KR37 738 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 ZNF677Q86XU0 584 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 OR6B3Q8NGW1 331 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM40Q8WWA1 233 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 XYLT2Q9H1B5 865 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 COX16Q9P0S2 106 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
TOP3B-213ENST00000457179 KAT6AQ92794 2004 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 VCLP18206 1134 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 ASPAP45381 313 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 KLF1Q13351 362 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-213ENST00000457179 ACAP1Q15027 740 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 ZNF484Q5JVG2 852 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 C1orf228Q6PIY5 440 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PAOXQ6QHF9 649 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 ZBED8Q8IZ13 594 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 CCDC89Q8N998 374 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 SKA1Q96BD8 255 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 OXNAD1Q96HP4 312 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-213ENST00000457179 USP29Q9HBJ7 922 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PFDN4Q9NQP4 134 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 ZNF180Q9UJW8 692 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TNFSF13BQ9Y275 285 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TSPAN1O60635 241 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 SMIM10L2AP0DMW4 78 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 SMIM10L2BP0DMW5 78 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 CLDN10P78369 228 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PTP4A2Q12974 167 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PDIA2Q13087 525 aaKnown RBP14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TRIP10Q15642 601 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PAN2Q504Q3 1202 aaKnown RBP14.03□□□□□ -0.16
TOP3B-213ENST00000457179 SPDYAQ5MJ70 313 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TWF2Q6IBS0 349 aaKnown RBP14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PDSS2Q86YH6 399 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TREML1Q86YW5 311 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 SHCBP1Q8NEM2 672 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 JOSD2Q8TAC2 188 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 HSPH1Q92598 858 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 USP6NLQ92738 828 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 CALN1Q9BXU9 219 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 DPP3Q9NY33 737 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PARP14Q460N5 1801 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 PTPRFP10586 1907 aa14.03□□□□□ -0.16
TOP3B-213ENST00000457179 C15orf38-AP3S2A0A0A6YYH1 394 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 TMEM221A6NGB7 291 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 TYROBPO43914 113 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 KITP10721 976 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 UQCRBP14927 111 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 PSMA2P25787 234 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 VARSP26640 1264 aaKnown RBP14.02□□□□□ -0.16
TOP3B-213ENST00000457179 NDST1P52848 882 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 RABGGTBP53611 331 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 EPHB1P54762 984 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 CAV1Q03135 178 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 HIC1Q14526 733 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 TRMT5Q32P41 509 aaKnown RBP14.02□□□□□ -0.16
TOP3B-213ENST00000457179 PTPN20Q4JDL3 420 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 SH3PXD2AQ5TCZ1 1133 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 PLEKHA7Q6IQ23 1121 aa14.02□□□□□ -0.16
TOP3B-213ENST00000457179 NCCRP1Q6ZVX7 275 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms